RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SHANK1Q9Y566 2161 aa15.04■□□□□ -0
SEC13-210ENST00000428626 CTSBP07858 339 aa15.04■□□□□ -0
SEC13-210ENST00000428626 ACADLP28330 430 aa15.04■□□□□ -0
SEC13-210ENST00000428626 FOXN2P32314 431 aa15.04■□□□□ -0
SEC13-210ENST00000428626 CD151P48509 253 aa15.04■□□□□ -0
SEC13-210ENST00000428626 CD97P48960 835 aa15.04■□□□□ -0
SEC13-210ENST00000428626 CACNG1Q06432 222 aa15.04■□□□□ -0
SEC13-210ENST00000428626 PRKAA1Q13131 559 aa15.04■□□□□ -0
SEC13-210ENST00000428626 ZIC1Q15915 447 aa15.04■□□□□ -0
SEC13-210ENST00000428626 PTCHD3Q3KNS1 767 aa15.04■□□□□ -0
SEC13-210ENST00000428626 ZNF385CQ66K41 422 aaPredicted RBP15.04■□□□□ -0
SEC13-210ENST00000428626 CDHR3Q6ZTQ4 885 aa15.04■□□□□ -0
SEC13-210ENST00000428626 PEX26Q7Z412 305 aa15.04■□□□□ -0
SEC13-210ENST00000428626 TRIM73Q86UV7 250 aa15.04■□□□□ -0
SEC13-210ENST00000428626 GAS2L3Q86XJ1 694 aa15.04■□□□□ -0
SEC13-210ENST00000428626 TEX19Q8NA77 164 aa15.04■□□□□ -0
SEC13-210ENST00000428626 OR5AR1Q8NGP9 310 aa15.04■□□□□ -0
SEC13-210ENST00000428626 FLVCR1-AS1Q8TAF5 88 aa15.04■□□□□ -0
SEC13-210ENST00000428626 STYXQ8WUJ0 223 aa15.04■□□□□ -0
SEC13-210ENST00000428626 ATG4AQ8WYN0 398 aa15.04■□□□□ -0
SEC13-210ENST00000428626 CPT1BQ92523 772 aa15.04■□□□□ -0
SEC13-210ENST00000428626 TFGQ92734 400 aaPredicted RBP15.04■□□□□ -0
SEC13-210ENST00000428626 PPP1R2P1Q96PQ5 205 aa15.04■□□□□ -0
SEC13-210ENST00000428626 MVB12BQ9H7P6 319 aa15.04■□□□□ -0
SEC13-210ENST00000428626 LRRC40Q9H9A6 602 aa15.04■□□□□ -0
SEC13-210ENST00000428626 FAM60AQ9NP50 221 aa15.04■□□□□ -0
SEC13-210ENST00000428626 SMARCAL1Q9NZC9 954 aa15.04■□□□□ -0
SEC13-210ENST00000428626 AMFRQ9UKV5 643 aa15.04■□□□□ -0
SEC13-210ENST00000428626 CAPN6Q9Y6Q1 641 aa15.04■□□□□ -0
SEC13-210ENST00000428626 PRRC2CQ9Y520 2896 aaKnown RBP15.03■□□□□ -0
SEC13-210ENST00000428626 SPTBN1Q01082 2364 aaKnown RBP15.03■□□□□ -0
SEC13-210ENST00000428626 CCDC162PA2VCL2 907 aa15.03■□□□□ -0
SEC13-210ENST00000428626 BHMG1C9JSJ3 638 aaPredicted RBP15.03■□□□□ -0
SEC13-210ENST00000428626 H3BMH7 237 aa15.03■□□□□ -0
SEC13-210ENST00000428626 IFRD1O00458 451 aaPredicted RBP15.03■□□□□ -0
SEC13-210ENST00000428626 MSL3P1P0C860 447 aa15.03■□□□□ -0
SEC13-210ENST00000428626 CETN2P41208 172 aa15.03■□□□□ -0
SEC13-210ENST00000428626 GRIA1P42261 906 aa15.03■□□□□ -0
SEC13-210ENST00000428626 GABRA4P48169 554 aa15.03■□□□□ -0
SEC13-210ENST00000428626 CCL11P51671 97 aa15.03■□□□□ -0
SEC13-210ENST00000428626 ITGA1P56199 1179 aa15.03■□□□□ -0
SEC13-210ENST00000428626 RPA4Q13156 261 aa15.03■□□□□ -0
SEC13-210ENST00000428626 BRD3Q15059 726 aa15.03■□□□□ -0
SEC13-210ENST00000428626 NADK2Q4G0N4 442 aa15.03■□□□□ -0
SEC13-210ENST00000428626 PRUNE1Q86TP1 453 aa15.03■□□□□ -0
SEC13-210ENST00000428626 AMIGO1Q86WK6 493 aa15.03■□□□□ -0
SEC13-210ENST00000428626 TMEM151BQ8IW70 566 aa15.03■□□□□ -0
SEC13-210ENST00000428626 SYTL1Q8IYJ3 562 aa15.03■□□□□ -0
SEC13-210ENST00000428626 OR52K1Q8NGK4 314 aa15.03■□□□□ -0
SEC13-210ENST00000428626 OR13J1Q8NGT2 312 aa15.03■□□□□ -0
SEC13-210ENST00000428626 THAP4Q8WY91 577 aa15.03■□□□□ -0
SEC13-210ENST00000428626 ZNF778Q96MU6 729 aa15.03■□□□□ -0
SEC13-210ENST00000428626 ING2Q9H160 280 aa15.03■□□□□ -0
SEC13-210ENST00000428626 SPHK1Q9NYA1 384 aa15.03■□□□□ -0
SEC13-210ENST00000428626 ACTR10Q9NZ32 417 aa15.03■□□□□ -0
SEC13-210ENST00000428626 SLC2A6Q9UGQ3 507 aa15.03■□□□□ -0
SEC13-210ENST00000428626 TCFL5Q9UL49 500 aa15.03■□□□□ -0
SEC13-210ENST00000428626 SLC5A10A0PJK1 596 aa15.02■□□□□ -0
SEC13-210ENST00000428626 MATN2O00339 956 aa15.02■□□□□ -0
SEC13-210ENST00000428626 OR1I1O60431 355 aa15.02■□□□□ -0
SEC13-210ENST00000428626 IPO7O95373 1038 aaKnown RBP15.02■□□□□ -0
SEC13-210ENST00000428626 KLK3P07288 261 aaPredicted RBP15.02■□□□□ -0
SEC13-210ENST00000428626 RAB40ALP0C0E4 278 aa15.02■□□□□ -0
SEC13-210ENST00000428626 MSNP26038 577 aaKnown RBP15.02■□□□□ -0
SEC13-210ENST00000428626 UQCRFS1P47985 274 aa15.02■□□□□ -0
SEC13-210ENST00000428626 GSDMDP57764 484 aa15.02■□□□□ -0
SEC13-210ENST00000428626 DEFB110Q30KQ9 67 aa15.02■□□□□ -0
SEC13-210ENST00000428626 SPESP1Q6UW49 350 aa15.02■□□□□ -0
SEC13-210ENST00000428626 UNC5AQ6ZN44 842 aa15.02■□□□□ -0
SEC13-210ENST00000428626 KIAA1328Q86T90 577 aa15.02■□□□□ -0
SEC13-210ENST00000428626 ZBTB2Q8N680 514 aa15.02■□□□□ -0
SEC13-210ENST00000428626 LMNTD1Q8N9Z9 388 aa15.02■□□□□ -0
SEC13-210ENST00000428626 TTC13Q8NBP0 860 aa15.02■□□□□ -0
SEC13-210ENST00000428626 CLIP3Q96DZ5 547 aa15.02■□□□□ -0
SEC13-210ENST00000428626 HES6Q96HZ4 224 aa15.02■□□□□ -0
SEC13-210ENST00000428626 OR2A14Q96R47 310 aa15.02■□□□□ -0
SEC13-210ENST00000428626 BAG1Q99933 345 aaPredicted RBP15.02■□□□□ -0
SEC13-210ENST00000428626 NLNQ9BYT8 704 aa15.02■□□□□ -0
SEC13-210ENST00000428626 ACTR5Q9H9F9 607 aaPredicted RBP15.02■□□□□ -0
SEC13-210ENST00000428626 PLAGL1Q9UM63 463 aa15.02■□□□□ -0
SEC13-210ENST00000428626 ICE1Q9Y2F5 2266 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 GOLGA6L9A6NEM1 432 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 C2orf74A8MZ97 194 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 MIF4GDA9UHW6 222 aaKnown RBP15.01□□□□□ -0.01
SEC13-210ENST00000428626 ZNF749O43361 778 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 CEACAM4O75871 244 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 AP2A2O94973 939 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 UGT2B7P16662 529 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 CYP2A7P20853 494 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 PEBP1P30086 187 aaKnown RBP15.01□□□□□ -0.01
SEC13-210ENST00000428626 NSG1P42857 185 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 FOXL2P58012 376 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 SEMA3AQ14563 771 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 ITIH4Q14624 930 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 OASLQ15646 514 aaKnown RBP15.01□□□□□ -0.01
SEC13-210ENST00000428626 P3H1Q32P28 736 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 PAPD7Q5XG87 772 aaKnown RBP15.01□□□□□ -0.01
SEC13-210ENST00000428626 PACS1Q6VY07 963 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 ZNF534Q76KX8 674 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 UBL4BQ8N7F7 174 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms