RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TDRKHQ9Y2W6 561 aaKnown RBP13.24□□□□□ -0.29
SNX3-204ENST00000426155 HEBP2Q9Y5Z4 205 aa13.24□□□□□ -0.29
SNX3-204ENST00000426155 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 TLCD2A6NGC4 264 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 STMND1H3BQB6 276 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 POLR1CO15160 346 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 TOX3O15405 576 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 GPC4O75487 556 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 EBLN1P0CF75 366 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 FOLR1P15328 257 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 NELFEP18615 380 aaKnown RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 PAMP19021 973 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 AOAHP28039 575 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 FMO4P31512 558 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 PPARGP37231 505 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 RAB15P59190 212 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 HP1BP3Q5SSJ5 553 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 ZNF470Q6ECI4 717 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 MRNIPQ6NTE8 343 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 NEPROQ6NW34 567 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 ARMC6Q6NXE6 501 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 TIPARPQ7Z3E1 657 aaKnown RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 TMEM135Q86UB9 458 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 SLC22A15Q8IZD6 547 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 CFAP61Q8NHU2 1237 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 ZFPM2Q8WW38 1151 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 STAMBPL1Q96FJ0 436 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 BBC3Q96PG8 261 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 CCNL2Q96S94 520 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 KRT12Q99456 494 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 WDR83Q9BRX9 315 aaKnown RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 TRIM31Q9BZY9 425 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 KLHL25Q9H0H3 589 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 SRMSQ9H3Y6 488 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 MVB12BQ9H7P6 319 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 FBXO8Q9NRD0 319 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 FBXO6Q9NRD1 293 aaPredicted RBP13.23□□□□□ -0.29
SNX3-204ENST00000426155 KCND1Q9NSA2 647 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
SNX3-204ENST00000426155 STK17BO94768 372 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 TIAF1O95411 115 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 PVRP15151 417 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 OGNP20774 298 aaKnown RBP13.22□□□□□ -0.29
SNX3-204ENST00000426155 RPS3P23396 243 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX3-204ENST00000426155 SLC1A2P43004 574 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 MPP1Q00013 466 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 C2orf54Q08AI8 447 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 ABRQ12979 859 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 CTBP1Q13363 440 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 TUBB3Q13509 450 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 KIAA1614Q5VZ46 1190 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 CEACAM20Q6UY09 585 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SYT10Q6XYQ8 523 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SDCCAG8Q86SQ7 713 aaPredicted RBP13.22□□□□□ -0.29
SNX3-204ENST00000426155 TRIM73Q86UV7 250 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 AMIGO1Q86WK6 493 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 IGDCC3Q8IVU1 814 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 ADGRF3Q8IZF5 1079 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 OR5K2Q8NHB8 316 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 NKD1Q969G9 470 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SLC41A2Q96JW4 573 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 TSSK1BQ9BXA7 367 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 B3GNT4Q9C0J1 378 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 TRIT1Q9H3H1 467 aaKnown RBP13.22□□□□□ -0.29
SNX3-204ENST00000426155 TFB2MQ9H5Q4 396 aaKnown RBP13.22□□□□□ -0.29
SNX3-204ENST00000426155 C20orf96Q9NUD7 363 aaPredicted RBP13.22□□□□□ -0.29
SNX3-204ENST00000426155 SPHK1Q9NYA1 384 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SEMA5BQ9P283 1151 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SLC17A6Q9P2U8 582 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 POMT2Q9UKY4 750 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 NFS1Q9Y697 457 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SPTBP11277 2137 aa13.22□□□□□ -0.29
SNX3-204ENST00000426155 SLC9B1P1A6NJY1 282 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 CCDC188H7C350 402 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 RAD1O60671 282 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 USP1O94782 785 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 APOA4P06727 396 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 ST6GAL1P15907 406 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 CD82P27701 267 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 PEBP1P30086 187 aaKnown RBP13.21□□□□□ -0.29
SNX3-204ENST00000426155 CASQ1P31415 396 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 BDKRB1P46663 353 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 ITGA8P53708 1063 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 UCNP55089 124 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 VAC14Q08AM6 782 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 GRB7Q14451 532 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 CRYMQ14894 314 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 TMED2Q15363 201 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 GPR19Q15760 415 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 LONRF1Q17RB8 773 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 BBS9Q3SYG4 887 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 RNF187Q5TA31 235 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms