RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 KLF11O14901 512 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 PAPSS1O43252 624 aaPredicted RBP3.49□□□□□ -1.85
LINC00397-201ENST00000422074 CLTBP09497 229 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 MMP9P14780 707 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 SP100P23497 879 aaPredicted RBP3.49□□□□□ -1.85
LINC00397-201ENST00000422074 SLC6A6P31641 620 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 PSMB10P40306 273 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 CLNS1AP54105 237 aaKnown RBP3.49□□□□□ -1.85
LINC00397-201ENST00000422074 SIM2Q14190 667 aaPredicted RBP3.49□□□□□ -1.85
LINC00397-201ENST00000422074 FAM98BQ52LJ0 330 aaKnown RBP3.49□□□□□ -1.85
LINC00397-201ENST00000422074 HYIQ5T013 277 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 ARHGEF16Q5VV41 709 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 ITPRIPL1Q6GPH6 555 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 TRIM65Q6PJ69 517 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 PIGZQ86VD9 579 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 RNF128Q8TEB7 428 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 ZNRF4Q8WWF5 429 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 FGFBP2Q9BYJ0 223 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 LARSQ9P2J5 1176 aaKnown RBP3.49□□□□□ -1.85
LINC00397-201ENST00000422074 RHCGQ9UBD6 479 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 NME7Q9Y5B8 376 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 LRRC72A6NJI9 287 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 AP3D1O14617 1153 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 RNASEH1O60930 286 aaKnown RBP3.48□□□□□ -1.85
LINC00397-201ENST00000422074 SORBS2O94875 1100 aaKnown RBP3.48□□□□□ -1.85
LINC00397-201ENST00000422074 CAPN3P20807 821 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 CA4P22748 312 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 CA6P23280 308 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 HADHAP40939 763 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 MAGEA11P43364 429 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 RXRGP48443 463 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 EIF5P55010 431 aaKnown RBP3.48□□□□□ -1.85
LINC00397-201ENST00000422074 B3GALT5-AS1P59052 145 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 SNRPD1P62314 119 aaKnown RBP3.48□□□□□ -1.85
LINC00397-201ENST00000422074 SIRPAP78324 504 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 CDR2Q01850 454 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 PLA2G7Q13093 441 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 NR1D2Q14995 579 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 TCTE1Q5JU00 501 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 DNAJC22Q8N4W6 341 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 DCLK2Q8N568 766 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 TTC39CQ8N584 583 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 BMPERQ8N8U9 685 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 FGFBP3Q8TAT2 258 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 DYRK2Q92630 601 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 NEK1Q96PY6 1258 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 FNBP1Q96RU3 617 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 SDF4Q9BRK5 362 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 TRIM51Q9BSJ1 452 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 CABLES2Q9BTV7 478 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 RTN4RQ9BZR6 473 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 UBXN6Q9BZV1 441 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 HRH4Q9H3N8 390 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 KCNK15Q9H427 330 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 SDR39U1Q9NRG7 319 aaPredicted RBP3.48□□□□□ -1.85
LINC00397-201ENST00000422074 WSB2Q9NYS7 404 aaPredicted RBP3.48□□□□□ -1.85
LINC00397-201ENST00000422074 TAS2R14Q9NYV8 317 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 ZDHHC2Q9UIJ5 367 aa3.48□□□□□ -1.85
LINC00397-201ENST00000422074 ANKRD18BA2A2Z9 1011 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 CDC123O75794 336 aaPredicted RBP3.47□□□□□ -1.85
LINC00397-201ENST00000422074 GPIP06744 558 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 ACSL1P33121 698 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 KRT2P35908 639 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 PNLIPRP2P54317 469 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 DSCR10P59022 87 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 CX3CL1P78423 397 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 TAF13Q15543 124 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 RAB41Q5JT25 222 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 Q6ZSR9 355 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 TRIML1Q8N9V2 468 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 BARD1Q99728 777 aaKnown RBP3.47□□□□□ -1.85
LINC00397-201ENST00000422074 VGLL1Q99990 258 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 FTOQ9C0B1 505 aaKnown RBP eCLIP3.47□□□□□ -1.85
LINC00397-201ENST00000422074 SPATC1LQ9H0A9 340 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 TMX4Q9H1E5 349 aaPredicted RBP3.47□□□□□ -1.85
LINC00397-201ENST00000422074 CHMP1AQ9HD42 196 aaPredicted RBP3.47□□□□□ -1.85
LINC00397-201ENST00000422074 TBC1D22BQ9NU19 505 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 BLOC1S4Q9NUP1 217 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 TAB2Q9NYJ8 693 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 FBXO2Q9UK22 296 aaPredicted RBP3.47□□□□□ -1.85
LINC00397-201ENST00000422074 PLAGL1Q9UM63 463 aa3.47□□□□□ -1.85
LINC00397-201ENST00000422074 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 FSD2A1L4K1 749 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 E9PQ18 207 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 GAPDHSO14556 408 aaPredicted RBP3.46□□□□□ -1.86
LINC00397-201ENST00000422074 WDPCPO95876 746 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 SLC6A12P48065 614 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 HERV-K104P61576 105 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 SP3Q02447 781 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 PLEKHS1Q5SXH7 462 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 KRT79Q5XKE5 535 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 MZT2BQ6NZ67 158 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 TMEM178AQ8NBL3 297 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 FAM222BQ8WU58 562 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 NSL1Q96IY1 281 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 CHCHD6Q9BRQ6 235 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 P2RY12Q9H244 342 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 A4GALTQ9NPC4 353 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 HAUS2Q9NVX0 235 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms