RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 A0A1W2PQU0 124 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TCRBV7S2A1N4TA0A589 114 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 SUV39H1O43463 412 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 ATP6AP2O75787 350 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 UGT2B15P54855 530 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 HEATR4Q86WZ0 1026 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 MECRQ9BV79 373 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 ZSCAN32Q9NX65 697 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 FTSJ1Q9UET6 329 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 ANAPC2Q9UJX6 822 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 ARID1BQ8NFD5 2236 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TNS1Q9HBL0 1735 aaKnown RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 MTX2O75431 263 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 SPIN4Q56A73 249 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 LYSMD4Q5XG99 296 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PROSER1Q86XN7 944 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TMEM25Q86YD3 366 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PLXDC1Q8IUK5 500 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TRAM1L1Q8N609 369 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 DCAKDQ8WVC6 231 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 CRYGNQ8WXF5 182 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PHF11Q9UIL8 331 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TUBGCP6Q96RT7 1819 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 BBIP1A8MTZ0 92 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 XKRYO14609 159 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 CCDC159P0C7I6 412 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 NQO1P15559 274 aaKnown RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PRRT3Q5FWE3 981 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 MICU2Q8IYU8 434 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 SLC2A13Q96QE2 648 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 IRF2BPLQ9H1B7 796 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TMEM27Q9HBJ8 222 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 CALML5Q9NZT1 146 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 AXIN1O15169 862 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 SERPINA6P08185 405 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 HSPB3Q12988 150 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 GPRC6AQ5T6X5 926 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 LRRC70Q7Z2Q7 622 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 MREGQ8N565 214 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 ATP6V1C2Q8NEY4 427 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 Q96MT0 163 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 DCLRE1BQ9H816 532 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 STON1Q9Y6Q2 735 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TULP3O75386 442 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 OR6B1O95007 311 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TCEAL5Q5H9L2 206 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 RTL4Q6ZR62 310 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 C7orf57Q8NEG2 295 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 HHIPQ96QV1 700 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 REXO2Q9Y3B8 237 aaKnown RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 MUSKO15146 869 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 KERAO60938 352 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 FAM155BO75949 473 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PLGP00747 810 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PROCP04070 461 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 EPHA3P29320 983 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 CHRNA4P43681 627 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 PTPN5P54829 565 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 GSTM4Q03013 218 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 KLC1Q07866 573 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 GALNT18Q6P9A2 607 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 MBOAT1Q6ZNC8 495 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 C14orf80Q86SX3 495 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 ZC3H3Q8IXZ2 948 aaKnown RBP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 FBXO30Q8TB52 745 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TEX47Q8TBZ9 253 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 TSSK3Q96PN8 268 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTCH1-206ENST00000421141 SNX7Q9UNH6 387 aa10.54□□□□□ -0.72
PTCH1-206ENST00000421141 NIPSNAP2O75323 286 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 IFNGP01579 166 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 LAMP2P13473 410 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 TNFRSF4P43489 277 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 DEF8Q6ZN54 512 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 ZMIZ2Q8NF64 920 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 OR9A1PQ8NGU1 263 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CLHC1Q8NHS4 586 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PTCD3Q96EY7 689 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 TFB2MQ9H5Q4 396 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 AJAP1Q9UKB5 411 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PDPK1O15530 556 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PTX3P26022 381 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PREPP48147 710 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 NTHL1P78549 312 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SPIBQ01892 262 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 OR6Y1Q8NGX8 325 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MTERF1Q99551 399 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SPATA9Q9BWV2 254 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 ADAM30Q9UKF2 790 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 KCNK6Q9Y257 313 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 GSTM5P46439 218 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 BST1Q10588 318 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SHHQ15465 462 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PIK3R6Q5UE93 754 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 DUSP23Q9BVJ7 150 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PAPOLBQ9NRJ5 636 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms