RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 XKR8Q9H6D3 395 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 VPS37BQ9H9H4 285 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 LATS2Q9NRM7 1088 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 RAB6BQ9NRW1 208 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 KCND1Q9NSA2 647 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF148Q9UQR1 794 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 CDYLQ9Y232 598 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 TCAF1Q9Y4C2 921 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 KCNMB2Q9Y691 235 aa10.71□□□□□ -0.69
SSBP3-206ENST00000420121 RELNP78509 3460 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 H3BMH7 237 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 K7EM74 188 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 MATN2O00339 956 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 IFRD1O00458 451 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-206ENST00000420121 HCRTR1O43613 425 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 KATNA1O75449 491 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 CREG1O75629 220 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 SCRG1O75711 98 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 RECKO95980 971 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 MT-ND3P03897 115 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 CAPN1P07384 714 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 PVRP15151 417 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 CDH3P22223 829 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 RORAP35398 523 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 GABRA4P48169 554 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 RPS18P62269 152 aaKnown RBP10.7□□□□□ -0.7
SSBP3-206ENST00000420121 ERV3-1Q14264 604 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 KRT33BQ14525 404 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 LCN10Q6JVE6 187 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 ARMC6Q6NXE6 501 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 CYB5D1Q6P9G0 228 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 AFTPHQ6ULP2 937 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 AMIGO1Q86WK6 493 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 PTRH1Q86Y79 214 aaKnown RBP10.7□□□□□ -0.7
SSBP3-206ENST00000420121 LRRC8AQ8IWT6 810 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 OR4L1Q8NH43 312 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 OR8K5Q8NH50 307 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 OR1L3Q8NH93 324 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 APOBEC4Q8WW27 367 aaKnown RBP10.7□□□□□ -0.7
SSBP3-206ENST00000420121 ABHD17AQ96GS6 310 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 TRAPPC9Q96Q05 1148 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 ACTL8Q9H568 366 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 LZTFL1Q9NQ48 299 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 SPHK1Q9NYA1 384 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 PAK5Q9P286 719 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 MARCH4Q9P2E8 410 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-206ENST00000420121 KCND3Q9UK17 655 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 DRG1Q9Y295 367 aaKnown RBP10.7□□□□□ -0.7
SSBP3-206ENST00000420121 ANKRD12Q6UB98 2062 aa10.7□□□□□ -0.7
SSBP3-206ENST00000420121 PTPN13Q12923 2485 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 GSAPA4D1B5 854 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 C21orf140B9A014 251 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 QSOX1O00391 747 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 CPNE3O75131 537 aaKnown RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 GPC4O75487 556 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 WISP1O95388 367 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 FTH1P02794 183 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 APRTP07741 180 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 PEBP1P30086 187 aaKnown RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 CCR7P32248 378 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 KCNJ1P48048 391 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 LMAN1P49257 510 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ARL4DP49703 201 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 PRKAA1Q13131 559 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 IL10RAQ13651 578 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 BRD3Q15059 726 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ZIC1Q15915 447 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 PLEKHS1Q5SXH7 462 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ZNF385CQ66K41 422 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 PPP1R21Q6ZMI0 780 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 UNC5AQ6ZN44 842 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ATG14Q6ZNE5 492 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 CDHR3Q6ZTQ4 885 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 LDB1Q86U70 411 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 TMEM126BQ8IUX1 230 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 VRK3Q8IV63 474 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 TBC1D21Q8IYX1 336 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 DSELQ8IZU8 1212 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 OR5K2Q8NHB8 316 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ELMO1Q92556 727 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 PEX13Q92968 403 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 LRFN5Q96NI6 719 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 OR2A14Q96R47 310 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 MENTQ9BUN1 341 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 KLHL25Q9H0H3 589 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 FAM60AQ9NP50 221 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ZNF71Q9NQZ8 489 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 EIF2B3Q9NR50 452 aaKnown RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 CHRAC1Q9NRG0 131 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 TREX1Q9NSU2 369 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 SOHLH2Q9NX45 425 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 ACTR10Q9NZ32 417 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 POLHQ9Y253 713 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 PCDHB3Q9Y5E6 796 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 HEMK1Q9Y5R4 338 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-206ENST00000420121 NUP210LQ5VU65 1888 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 HECTD1Q9ULT8 2610 aa10.69□□□□□ -0.7
SSBP3-206ENST00000420121 TCRBV7S3A2A0A539 114 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 CDC14CA4D256 554 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms