RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 TCF12Q99081 682 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 TRIT1Q9H3H1 467 aaKnown RBP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 ASIC3Q9UHC3 531 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 SMG1Q96Q15 3661 aaKnown RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 ZCWPW2A0A1B0GU75 182 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 BTN3A1O00481 513 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 APOA4P06727 396 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 FOLR1P15328 257 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 OGNP20774 298 aaKnown RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 HSD11B2P80365 405 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 DHX34Q14147 1143 aaKnown RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 KCNAB1Q14722 419 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 DNAJC21Q5F1R6 531 aaKnown RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 CTSL3PQ5NE16 218 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 CYB5D1Q6P9G0 228 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 TIPARPQ7Z3E1 657 aaKnown RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 CACNA2D3Q8IZS8 1091 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 NLGN4XQ8N0W4 816 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 D2HGDHQ8N465 521 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 IL22RA1Q8N6P7 574 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 SIDT2Q8NBJ9 832 aaKnown RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 NLGN4YQ8NFZ3 816 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 ZNF669Q96BR6 464 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-202ENST00000419181 SIGLEC10Q96LC7 697 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 PPM1MQ96MI6 270 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 BIRC8Q96P09 236 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 XKR8Q9H6D3 395 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 KCND1Q9NSA2 647 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 POLG2Q9UHN1 485 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 ICKQ9UPZ9 632 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 RPS6KL1Q9Y6S9 549 aa19.72■□□□□ 0.75
GTF3A-202ENST00000419181 GSAPA4D1B5 854 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 DNALI1O14645 258 aaPredicted RBP19.71■□□□□ 0.75
GTF3A-202ENST00000419181 SLCO2B1O94956 709 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 ZBTB11O95625 1053 aaPredicted RBP19.71■□□□□ 0.75
GTF3A-202ENST00000419181 TPBGLP0DKB5 382 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 WT1P19544 449 aaPredicted RBP19.71■□□□□ 0.75
GTF3A-202ENST00000419181 ADARP55265 1226 aaKnown RBP19.71■□□□□ 0.75
GTF3A-202ENST00000419181 EIF3BP55884 814 aaKnown RBP19.71■□□□□ 0.75
GTF3A-202ENST00000419181 RHDQ02161 417 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 TUBB3Q13509 450 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 TMED2Q15363 201 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.71■□□□□ 0.75
GTF3A-202ENST00000419181 NEPROQ6NW34 567 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 CILP2Q8IUL8 1156 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 ADGRF3Q8IZF5 1079 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 PITPNM3Q9BZ71 974 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 ULBP3Q9BZM4 244 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 C1GALT1Q9NS00 363 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 IL1RAPL1Q9NZN1 696 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 BTRCQ9Y297 605 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 PCDHGA4Q9Y5G9 962 aa19.71■□□□□ 0.75
GTF3A-202ENST00000419181 PFDN6O15212 129 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 ATXN7O15265 892 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-202ENST00000419181 USP1O94782 785 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 EBLN1P0CF75 366 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 ZNF28P17035 718 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 IVDP26440 423 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 MAP4P27816 1152 aaKnown RBP19.7■□□□□ 0.74
GTF3A-202ENST00000419181 PRDX3P30048 256 aaKnown RBP19.7■□□□□ 0.74
GTF3A-202ENST00000419181 SHMT2P34897 504 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 ARL4DP49703 201 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 ACY1Q03154 408 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 COL9A2Q14055 689 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-202ENST00000419181 MAP7Q14244 749 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 FBXO38Q6PIJ6 1188 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 CENPUQ71F23 418 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 HOOK3Q86VS8 718 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 PPP1R3BQ86XI6 285 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 KLHL7Q8IXQ5 586 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 ELMO2Q96JJ3 720 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 RUNDC3BQ96NL0 473 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 TWSG1Q9GZX9 223 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 PDE7BQ9NP56 450 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 MAD1L1Q9Y6D9 718 aa19.7■□□□□ 0.74
GTF3A-202ENST00000419181 ATRXP46100 2492 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 C2orf74A8MZ97 194 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 ERVH48-1M5A8F1 160 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 KPNA5O15131 536 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 ESR1P03372 595 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 LIFP15018 202 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 CDH3P22223 829 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 DR1Q01658 176 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 KIAA1614Q5VZ46 1190 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 IZUMO3Q5VZ72 239 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 ZNF470Q6ECI4 717 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 PCSK4Q6UW60 755 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 UNC5DQ6UXZ4 953 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 UNC5AQ6ZN44 842 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 SYDE1Q6ZW31 735 aaPredicted RBP19.69■□□□□ 0.74
GTF3A-202ENST00000419181 OTOAQ7RTW8 1153 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 PCGF5Q86SE9 256 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 RASGRP3Q8IV61 690 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 SLC39A7Q92504 469 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 FGF21Q9NSA1 209 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 INTS10Q9NVR2 710 aaKnown RBP19.69■□□□□ 0.74
GTF3A-202ENST00000419181 ACTR10Q9NZ32 417 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 OR6C2Q9NZP2 312 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 RNF14Q9UBS8 474 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms