RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RELL1Q8IUW5 271 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 SIDT2Q8NBJ9 832 aaKnown RBP22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 OR4E2Q8NGC2 313 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 OR5AR1Q8NGP9 310 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 NXPE2Q96DL1 559 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 GPR21Q99679 349 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 HGH1Q9BTY7 390 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 GALPQ9UBC7 116 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 TRMT6Q9UJA5 497 aaKnown RBP22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 USP24Q9UPU5 2620 aa22.47■■□□□ 1.19
SMARCB1-205ENST00000417137 PIKFYVEQ9Y2I7 2098 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 HGSO14964 777 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 CAPN5O15484 640 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 ENO3P13929 434 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 CD9P21926 228 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 PHBP35232 272 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 PRKAA1Q13131 559 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 GBX1Q14549 363 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 RTP5Q14D33 572 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 NEK10Q6ZWH5 1172 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 LSMEM2Q8N112 164 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 GPATCH11Q8N954 259 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 OR52E1Q8NGJ3 308 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 MAGEC3Q8TD91 643 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 JPH3Q8WXH2 748 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 CCDC74BQ96LY2 380 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 NDNQ99608 321 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 POLR1BQ9H9Y6 1135 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 HRASLS2Q9NWW9 162 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 SLC17A6Q9P2U8 582 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 TDRKHQ9Y2W6 561 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 VWA7Q9Y334 891 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 AK5Q9Y6K8 562 aa22.46■■□□□ 1.19
SMARCB1-205ENST00000417137 PTPRBP23467 1997 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 ZFHX4Q86UP3 3567 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 OR6C74A6NCV1 312 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 OR5K3A6NET4 321 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 FAM159BA6NKW6 160 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 EIF3FO00303 357 aaPredicted RBP22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 MATN2O00339 956 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 TOX3O15405 576 aaPredicted RBP22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 C9P02748 559 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 THRAP10827 490 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 MPSTP25325 297 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 CCNFP41002 786 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 LSSP48449 732 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 ACSBG2Q5FVE4 666 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 SNAP47Q5SQN1 464 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 LRRC8EQ6NSJ5 796 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 FAM45BPQ6NSW5 357 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 RAB11FIP2Q7L804 512 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 AMIGO1Q86WK6 493 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 DCUN1D3Q8IWE4 304 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 FBXO39Q8N4B4 442 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 FAM45AQ8TCE6 357 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 RSC1A1Q92681 617 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 GATA6Q92908 595 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 TGM7Q96PF1 710 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 TMEM9Q9P0T7 183 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 MED16Q9Y2X0 877 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 KNTC1P50748 2209 aa22.45■■□□□ 1.18
SMARCB1-205ENST00000417137 CSTF2P33240 577 aaKnown RBP eCLIP22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 SHMT2P34897 504 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 DEKP35659 375 aaKnown RBP22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 RGS4P49798 205 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 MN1Q10571 1320 aaPredicted RBP22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 SLMAPQ14BN4 828 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 KYNUQ16719 465 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 KLHL38Q2WGJ6 581 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 C3orf38Q5JPI3 329 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 TEX35Q5T0J7 233 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 HECTD2Q5U5R9 776 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 IRGCQ6NXR0 463 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 ZC3HC1Q86WB0 502 aaKnown RBP22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 CTAGE3PQ8IX95 158 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 AGBL5Q8NDL9 886 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 CD200R1Q8TD46 325 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 FBF1Q8TES7 1133 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 CPNE1Q99829 537 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 KLHL3Q9UH77 587 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 NFU1Q9UMS0 254 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 SATB2Q9UPW6 733 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 PCDHGA8Q9Y5G5 932 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 PSAT1Q9Y617 370 aa22.44■■□□□ 1.18
SMARCB1-205ENST00000417137 UNC13CQ8NB66 2214 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 A8MU76 341 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 PLD2O14939 933 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 MATN4O95460 622 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 MPC1LP0DKB6 136 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 ECHS1P30084 290 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 ABCG1P45844 678 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 GABREP78334 506 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 PDAP1Q13442 181 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 NAB1Q13506 487 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 RBM20Q5T481 1227 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 ARHGAP22Q7Z5H3 698 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 RAB42Q8N4Z0 105 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 LRRN4CLQ8ND94 238 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 RAD51AP1Q96B01 352 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 ELMO2Q96JJ3 720 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms