RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ACACAQ13085 2346 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 LSAMPQ13449 338 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 MAMLD1Q13495 774 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 SERINC3Q13530 473 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 KPNB1Q14974 876 aaKnown RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF284Q2VY69 593 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 TBC1D25Q3MII6 688 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 PARP15Q460N3 678 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 INO80DQ53TQ3 878 aaPredicted RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF805Q5CZA5 627 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ATXN7L2Q5T6C5 722 aaPredicted RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 SEL1L3Q68CR1 1132 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 GTF2IRD2BQ6EKJ0 949 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 KIAA1161Q6NSJ0 714 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 PCSK4Q6UW60 755 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 PARS2Q7L3T8 475 aaKnown RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ADGRG6Q86SQ4 1221 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 GTF2IRD2Q86UP8 949 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 DNAAF5Q86Y56 855 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 RBM12BQ8IXT5 1001 aaKnown RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 UMODL1-AS1Q8N2C9 162 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 EID2Q8N6I1 236 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 PRELID2Q8N945 189 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 TMEM145Q8NBT3 493 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 OR2AP1Q8NGE2 309 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 IL17DQ8TAD2 202 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 MIPOL1Q8TD10 442 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 SAP25Q8TEE9 199 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 DENND1AQ8TEH3 1009 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 MAIP1Q8WWC4 291 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 RAB7BQ96AH8 199 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF653Q96CK0 615 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 SLC7A6OSQ96CW6 309 aaPredicted RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 FEM1CQ96JP0 617 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 CNDP2Q96KP4 475 aaKnown RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 KLHL32Q96NJ5 620 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 TSC22D3Q99576 134 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 DHX35Q9H5Z1 703 aaKnown RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 FZD3Q9NPG1 666 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 NDUFA13Q9P0J0 144 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 SENP1Q9P0U3 644 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 PDP2Q9P2J9 529 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 PCSK1NQ9UHG2 260 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 OAZ3Q9UMX2 235 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ATP8A1Q9Y2Q0 1164 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 FADS3Q9Y5Q0 445 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 USH1CQ9Y6N9 552 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 SCINQ9Y6U3 715 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 KMT2BQ9UMN6 2715 aaPredicted RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 ARHGEF17Q96PE2 2063 aaPredicted RBP5.27□□□□□ -1.57
LINC00342-201ENST00000412393 LRP4O75096 1905 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 USP24Q9UPU5 2620 aa5.27□□□□□ -1.57
LINC00342-201ENST00000412393 CEP295Q9C0D2 2601 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 EME2A4GXA9 379 aaPredicted RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 IGLON5A6NGN9 336 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ARHGAP42A6NI28 874 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 F8W8V4 182 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 NEMP1O14524 444 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PRPF4O43172 522 aaKnown RBP eCLIP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 TSPAN6O43657 245 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 DNAJC6O75061 913 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CDH16O75309 829 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 RFPL3O75679 317 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ZWINTO95229 277 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PEX11BO96011 259 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PAK4O96013 591 aaPredicted RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 FGGP02679 453 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 SHBGP04278 402 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 C1SP09871 688 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 T-ENOLP0DO92 83 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 MYBL1P10243 752 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 TAC1P20366 129 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 IVDP26440 423 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PTPN4P29074 926 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 MIPP30301 263 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 RPS19P39019 145 aaKnown RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 NDST2P52849 883 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CLDN2P57739 230 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CDK18Q07002 472 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 DNAJC3Q13217 504 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 SGCGQ13326 291 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 TMED1Q13445 227 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 FGL2Q14314 439 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CYTH1Q15438 398 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 TAF11Q15544 211 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CA9Q16790 459 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ZMAT1Q5H9K5 638 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PPP6R3Q5H9R7 873 aaPredicted RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 DHRS13Q6UX07 377 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 KYAT3Q6YP21 454 aaKnown RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 GCNT7Q6ZNI0 430 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 Q6ZSR6 202 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 KANSL1Q7Z3B3 1105 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PTAR1Q7Z6K3 402 aaPredicted RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ABI3BPQ7Z7G0 1075 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 TTC7BQ86TV6 843 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ULK2Q8IYT8 1036 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ARFGAP1Q8N6T3 406 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms