RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ZNF717Q9BY31 904 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 A6NLC8 198 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 FAM155AB1AL88 458 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CHADO15335 359 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 IPO13O94829 963 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CH25HO95992 272 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TMEM11P17152 192 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 HNRNPH1P31943 449 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TNK2Q07912 1038 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 DSG2Q14126 1118 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TIGD2Q4W5G0 525 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 C6orf132Q5T0Z8 1188 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 GDPD4Q6W3E5 623 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 FAM92BQ6ZTR7 304 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TRAPPC6BQ86SZ2 158 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CAND1Q86VP6 1230 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 GKN2Q86XP6 184 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CMTM8Q8IZV2 173 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ENY2Q9NPA8 101 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TCHHQ07283 1943 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 H3BQ06 376 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SELENOVP59797 346 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 RASGEF1BQ0VAM2 473 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 GRM3Q14832 879 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ECM1Q16610 540 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SCGB2B2Q4G0G5 96 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TMEM161BQ8NDZ6 487 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 METTL8Q9H825 291 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CRTAC1Q9NQ79 661 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SERTAD3Q9UJW9 196 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ANXA2P2A6NMY6 339 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 FGF1P05230 155 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ANXA2P07355 339 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ACLYP53396 1101 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 PLCZ1Q86YW0 608 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 EPYCQ99645 322 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SLC25A23Q9BV35 468 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 IPPKQ9H8X2 491 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 KCNK4Q9NYG8 393 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 EIF2B4Q9UI10 523 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 RIMBP3CA6NJZ7 1639 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 RIMBP3BA6NNM3 1639 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 RIMBP3Q9UFD9 1639 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 OR51F1A6NGY5 319 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 RENP00797 406 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 QPRTQ15274 297 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 DCST1Q5T197 706 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 MAPK15Q8TD08 544 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 MEIS2O14770 477 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 SEC14L5O43304 696 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 TNFSF12O43508 249 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 HCKP08631 526 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 NMBRP28336 390 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 BDKRB1P46663 353 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 HCAR3P49019 387 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 MBLAC2Q68D91 279 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 MYDGFQ969H8 173 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 MRM3Q9HC36 420 aaKnown RBP8.27□□□□□ -1.08
SCN9A-203ENST00000409672 FARSAQ9Y285 508 aaKnown RBP8.27□□□□□ -1.08
SCN9A-203ENST00000409672 NPIPA5E9PKD4 350 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 CLPXO76031 633 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 JUNP05412 331 aaKnown RBP8.27□□□□□ -1.08
SCN9A-203ENST00000409672 GRM5P41594 1212 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF527Q8NB42 609 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 BSNDQ8WZ55 320 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 C12orf4Q9NQ89 552 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 NPIPA1Q9UND3 350 aa8.27□□□□□ -1.08
SCN9A-203ENST00000409672 ISPDA4D126 451 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 SYNGR4O95473 234 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CSTBP04080 98 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CACNG1Q06432 222 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 SIM2Q14190 667 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 PARP15Q460N3 678 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TRIM74Q86UV6 250 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 PRR18Q8N4B5 295 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TEFMQ96QE5 360 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 WDR55Q9H6Y2 383 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 DCLRE1BQ9H816 532 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 RC3H2Q9HBD1 1191 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF224Q9NZL3 707 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 PCYOX1Q9UHG3 505 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 SMCO3A2RU48 225 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 FOXO6A8MYZ6 492 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 LIASO43766 372 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 SEC24AO95486 1093 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CHRNA1P02708 482 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CSF2P04141 144 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 IRF2P14316 349 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 MAP3K8P41279 467 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 PURAQ00577 322 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 LRRC69Q6ZNQ3 347 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 OR8K5Q8NH50 307 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 MSLNLQ96KJ4 702 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 FBXO5Q9UKT4 447 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 HEBP2Q9Y5Z4 205 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 GJA8P48165 433 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms