RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ZNF749O43361 778 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 OR2B3O76000 313 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 CLDN1O95832 211 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 MBD3O95983 291 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 POLBP06746 335 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 TPM3P06753 285 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 UQCRHP07919 91 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 MYBL2P10244 700 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 BMP4P12644 408 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 ITGA3P26006 1051 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 RORAP35398 523 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 NR2C2P49116 596 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 ARSEP51690 589 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 KPNA2P52292 529 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 DCDP81605 110 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 ZBED6P86452 979 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 ZBTB17Q13105 803 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 AIMP2Q13155 320 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 TFDP2Q14188 446 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 PTCHD3Q3KNS1 767 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 TEX44Q53QW1 395 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 DCAF10Q5QP82 559 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 AGAP7PQ5VUJ5 663 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 C1QL3Q5VWW1 255 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 MTFR2Q6P444 385 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 FAM180AQ6UWF9 173 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 CERS6Q6ZMG9 384 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 RBM43Q6ZSC3 357 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 DET1Q7L5Y6 550 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 C11orf96Q7Z7L8 435 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 MRGPREQ86SM8 312 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 DAAM2Q86T65 1068 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 CNTD1Q8N815 330 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 OR2L2Q8NH16 312 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 HM13Q8TCT9 377 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 TFB1MQ8WVM0 346 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 DLG3Q92796 817 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 ULK4Q96C45 1275 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 EID2BQ96D98 161 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 C19orf60Q96EN9 201 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 RBM41Q96IZ5 413 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 AGAP4Q96P64 663 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 GBP5Q96PP8 586 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 VAT1Q99536 393 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 WDR77Q9BQA1 342 aaPredicted RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 CEP41Q9BYV8 373 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 MVB12BQ9H7P6 319 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 ZNHIT6Q9NWK9 470 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 SMOXQ9NWM0 555 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 P4HTMQ9NXG6 502 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 DDX56Q9NY93 547 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 CRLS1Q9UJA2 301 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 LUC7L2Q9Y383 392 aaKnown RBP7.51□□□□□ -1.21
LSM5-202ENST00000409292 SHANK1Q9Y566 2161 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 COL12A1Q99715 3063 aa7.51□□□□□ -1.21
LSM5-202ENST00000409292 A0A1W2PQJ5 194 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 CCDC66A2RUB6 948 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 A6NJY4 79 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 TMEM229AB2RXF0 380 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 PRSS44E7EML9 344 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 LRRTM2O43300 516 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 UGT1A9O60656 530 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 ANXA9O76027 345 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 STK10O94804 968 aaKnown RBP7.5□□□□□ -1.21
LSM5-202ENST00000409292 PRAMEF1O95521 474 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 CRTAMO95727 393 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 MT-CYBP00156 380 aaPredicted RBP7.5□□□□□ -1.21
LSM5-202ENST00000409292 KRT1P04264 644 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 GSTM1P09488 218 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 RNF224P0DH78 156 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 EDN3P14138 238 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 UGT1A6P19224 532 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 ITGALP20701 1170 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 UGT1A1P22309 533 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 UGT1A4P22310 534 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 PRDX3P30048 256 aaKnown RBP7.5□□□□□ -1.21
LSM5-202ENST00000409292 LMAN1P49257 510 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 CTSCP53634 463 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 WNT3AP56704 352 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 GSTM4Q03013 218 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 CDC16Q13042 620 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 MPP3Q13368 585 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 LAMB3Q13751 1172 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 PRPSAP1Q14558 356 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 IHHQ14623 411 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 MESDQ14696 234 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 BCL7AQ4VC05 210 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 KHDC1Q4VXA5 237 aaKnown RBP7.5□□□□□ -1.21
LSM5-202ENST00000409292 B3GNTL1Q67FW5 361 aaPredicted RBP7.5□□□□□ -1.21
LSM5-202ENST00000409292 TLDC1Q6P9B6 456 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 FAM198BQ6UWH4 519 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 Q6ZS92 163 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 APTXQ7Z2E3 356 aaKnown RBP7.5□□□□□ -1.21
LSM5-202ENST00000409292 PID1Q7Z2X4 250 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 AMIGO1Q86WK6 493 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 SLC25A41Q8N5S1 370 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 PQLC3Q8N755 202 aa7.5□□□□□ -1.21
LSM5-202ENST00000409292 SLC38A9Q8NBW4 561 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms