RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CDK3Q00526 305 aa13.65□□□□□ -0.22
AFF3-202ENST00000409236 Q8N402 240 aa13.65□□□□□ -0.22
AFF3-202ENST00000409236 PRDM4Q9UKN5 801 aa13.65□□□□□ -0.22
AFF3-202ENST00000409236 IFNGR1P15260 489 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 PRDX5P30044 214 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 FNTBP49356 437 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 ANTXR2P58335 489 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 MSANTD2Q6P1R3 559 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 FAM199XQ6PEV8 388 aaPredicted RBP13.65□□□□□ -0.23
AFF3-202ENST00000409236 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 OR4L1Q8NH43 312 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 COPS5Q92905 334 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 ASF1AQ9Y294 204 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 GAKO14976 1311 aa13.65□□□□□ -0.23
AFF3-202ENST00000409236 SHOXO15266 292 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 PAK4O96013 591 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 IL3P08700 152 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 RBM15BQ8NDT2 890 aaKnown RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 ARL5BQ96KC2 179 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 AP1M2Q9Y6Q5 423 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 A0A1W2PRQ8 180 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 BOLA2-SMG1P6H3BVE0 249 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 LIASO43766 372 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 CTHP32929 405 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 HTR2BP41595 481 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 CDH12P55289 794 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 SIM2Q14190 667 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 FAM35AQ86V20 835 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 C12orf71A8MTZ7 269 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 PRR5-ARHGAP8B1AHC4 643 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 HCRTR2O43614 444 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ARHGAP8P85298 464 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 SBK1Q52WX2 424 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF101Q8IZC7 436 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ATP6V1C2Q8NEY4 427 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 OR5K1Q8NHB7 308 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 GTPBP3Q969Y2 492 aaKnown RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 SYT16Q17RD7 645 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 KCTD9Q7L273 389 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 UNC5BQ8IZJ1 945 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 PGAP3Q96FM1 320 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF578Q96N58 590 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 ARL8BQ9NVJ2 186 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 RFPL1O75677 317 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF35P13682 527 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ITPKAP23677 461 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 RAB30Q15771 203 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF574Q6ZN55 896 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 VTCN1Q7Z7D3 282 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 OR12D3Q9UGF7 316 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 TCRBV9S1A1TA0A576 114 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 CLDN4O14493 209 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ERBB2P04626 1255 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 KCNA6P17658 529 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 MIPP30301 263 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 CRADDP78560 199 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 SAMD14Q8IZD0 417 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF676Q8N7Q3 588 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 PROKR2Q8NFJ6 384 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 TIFAQ96CG3 184 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 MAGEB17A8MXT2 336 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 AGR2O95994 175 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 TARDBPQ13148 414 aaKnown RBP eCLIP13.64□□□□□ -0.23
AFF3-202ENST00000409236 UAP1L1Q3KQV9 507 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 NCEH1Q6PIU2 408 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 SCUBE3Q8IX30 993 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 CDT1Q9H211 546 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 CBY1Q9Y3M2 126 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ICAM1P05362 532 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF143P52747 638 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 CASP9P55211 416 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF423Q2M1K9 1284 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ANKDD1AQ495B1 522 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 TOR1AIP1Q5JTV8 583 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 VSTM1Q6UX27 236 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 TWNKQ96RR1 684 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 WACQ9BTA9 647 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 GPATCH2LQ9NWQ4 482 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 NUDT4Q9NZJ9 180 aa13.64□□□□□ -0.23
AFF3-202ENST00000409236 ZNF282Q9UDV7 671 aaPredicted RBP13.64□□□□□ -0.23
AFF3-202ENST00000409236 SMSP52788 366 aa13.63□□□□□ -0.23
AFF3-202ENST00000409236 PCBP1Q15365 356 aaKnown RBP eCLIP13.63□□□□□ -0.23
AFF3-202ENST00000409236 ARSJQ5FYB0 599 aaPredicted RBP13.63□□□□□ -0.23
AFF3-202ENST00000409236 PRPF38BQ5VTL8 546 aaKnown RBP13.63□□□□□ -0.23
AFF3-202ENST00000409236 BTBD2Q9BX70 525 aa13.63□□□□□ -0.23
AFF3-202ENST00000409236 TNFRSF10DQ9UBN6 386 aa13.63□□□□□ -0.23
AFF3-202ENST00000409236 PTBP2Q9UKA9 531 aaKnown RBP13.63□□□□□ -0.23
AFF3-202ENST00000409236 C1QTNF3-AMACRE9PGA6 284 aa13.63□□□□□ -0.23
AFF3-202ENST00000409236 CREBL2O60519 120 aaPredicted RBP13.63□□□□□ -0.23
AFF3-202ENST00000409236 HOXB9P17482 250 aaPredicted RBP13.63□□□□□ -0.23
AFF3-202ENST00000409236 GSTM2P28161 218 aa13.63□□□□□ -0.23
AFF3-202ENST00000409236 ZNF616Q08AN1 781 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms