RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 H3BM21 787 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 CMPK1P30085 196 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 PPM1AP35813 382 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 CDH8P55286 799 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 MON1AQ86VX9 555 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 ZFAND2BQ8WV99 257 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 RNF38Q9H0F5 515 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 ENY2Q9NPA8 101 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 BRD7Q9NPI1 651 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 MKS1Q9NXB0 559 aa11.96□□□□□ -0.49
SHANK2-203ENST00000409161 M0R233 179 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 ANXA4P09525 319 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-203ENST00000409161 AKR1A1P14550 325 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 NCK1P16333 377 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 RALGPS2Q86X27 583 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-203ENST00000409161 LPGAT1Q92604 370 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 NKD1Q969G9 470 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 COQ8BQ96D53 544 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 CEP295NLQ96MC4 621 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 CCRL2O00421 344 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 COL6A1P12109 1028 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 IL7RP16871 459 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 FMO1Q01740 532 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 ATAD1Q8NBU5 361 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 VANGL1Q8TAA9 524 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-203ENST00000409161 KCNN1Q92952 543 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 USP29Q9HBJ7 922 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 MAP10Q9P2G4 905 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 CXCL11O14625 94 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 GRM6O15303 877 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 SPARCP09486 303 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 C2orf80Q0P641 193 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 GRK1Q15835 563 aa11.96□□□□□ -0.5
SHANK2-203ENST00000409161 RUVBL1Q9Y265 456 aaKnown RBP11.96□□□□□ -0.5
SHANK2-203ENST00000409161 KCNU1A8MYU2 1149 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 C2P06681 752 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 DNAJB1P25685 340 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 VARSP26640 1264 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 WNT3AP56704 352 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MXD1Q05195 221 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MERTKQ12866 999 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 RBM18Q96H35 190 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 APOLD1Q96LR9 279 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 TBATAQ96M53 351 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 POLR2J3Q9H1A7 115 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 GLS2Q9UI32 602 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MAGED1Q9Y5V3 778 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 DIP2BQ9P265 1576 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SPATA31A6Q5VVP1 1343 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 LMO7Q8WWI1 1683 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 KIF13AQ9H1H9 1805 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 TTC34A8MYJ7 566 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 FSTL1Q12841 308 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 AIMP2Q13155 320 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ZNF829Q3KNS6 432 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SPIN4Q56A73 249 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 PHC2Q8IXK0 858 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 OR52J3Q8NH60 311 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 PGLYRP2Q96PD5 576 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 IFT27Q9BW83 186 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ITPAQ9BY32 194 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 GDAP2Q9NXN4 497 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SLC39A1Q9NY26 324 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 DISC1C4P0D8 188 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 NDST3O95803 873 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 RORAP35398 523 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 RFX5P48382 616 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SSTP61278 116 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MOGQ16653 247 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 TPRG1LQ5T0D9 272 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 IL23RQ5VWK5 629 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ZNF431Q8TF32 576 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 NKD2Q969F2 451 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 FAM84AQ96KN4 292 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 LGMNQ99538 433 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 PCDHGA11Q9Y5H2 935 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 PGLSO95336 258 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 CAPZA1P52907 286 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 LSM14AQ8ND56 463 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SLC22A17Q8WUG5 538 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 OSTF1Q92882 214 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ZNF700Q9H0M5 742 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 EBF3Q9H4W6 596 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 POMPQ9Y244 141 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 NELFEP18615 380 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 CD83Q01151 205 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 TARDBPQ13148 414 aaKnown RBP eCLIP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 TPGS1Q6ZTW0 290 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 COX18Q8N8Q8 333 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SPATA22Q8NHS9 363 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 PDCD2LQ9BRP1 358 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 FEM1AQ9BSK4 669 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 GLOD4Q9HC38 313 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms