RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 GTF2H3Q13889 308 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 ABRAXAS2Q15018 415 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 HACD2Q6Y1H2 254 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 RNF165Q6ZSG1 346 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 ADGRG6Q86SQ4 1221 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 TDHQ8IZJ6 230 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 SFRP1Q8N474 314 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 PCYOX1LQ8NBM8 494 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 CSGALNACT1Q8TDX6 532 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 RSPH9Q9H1X1 276 aaPredicted RBP18.53■□□□□ 0.56
USP39-202ENST00000409025 OR2AG1Q9H205 316 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 TRIM39Q9HCM9 518 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 NDUFAF1Q9Y375 327 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 RNF11Q9Y3C5 154 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 CEP290O15078 2479 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 PSIP1O75475 530 aaKnown RBP18.52■□□□□ 0.56
USP39-202ENST00000409025 PBLDP30039 288 aaPredicted RBP18.52■□□□□ 0.56
USP39-202ENST00000409025 PREPP48147 710 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 CAMK2GQ13555 558 aaPredicted RBP18.52■□□□□ 0.56
USP39-202ENST00000409025 NR6A1Q15406 480 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 CST6Q15828 149 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 ZNF423Q2M1K9 1284 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 PDCD4Q53EL6 469 aaKnown RBP18.52■□□□□ 0.56
USP39-202ENST00000409025 AAGABQ6PD74 315 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 TRIM74Q86UV6 250 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 C1orf50Q9BV19 199 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 SLC29A3Q9BZD2 475 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 BRINP2Q9C0B6 783 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 ACTR8Q9H981 624 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 KLQ9UEF7 1012 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 PACSIN3Q9UKS6 424 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 ANGPTL2Q9UKU9 493 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 PCDHGA7Q9Y5G6 932 aa18.52■□□□□ 0.56
USP39-202ENST00000409025 SLC28A1O00337 649 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 FFAR3O14843 346 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 MID1O15344 667 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 GPR42O15529 346 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 RGS14O43566 566 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ULK1O75385 1050 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ADH1BP00325 375 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 DRD3P35462 400 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 DPP6P42658 865 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ERFP50548 548 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 THOP1P52888 689 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 EMX2Q04743 252 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 CCNIQ14094 377 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 PTCHD3Q3KNS1 767 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 WLSQ5T9L3 541 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 SLC22A15Q8IZD6 547 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 KCNV2Q8TDN2 545 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 TSPEARQ8WU66 669 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ROPN1LQ96C74 230 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 FBXL8Q96CD0 374 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ZNF514Q96K75 400 aaPredicted RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 PPP3R2Q96LZ3 170 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 FOPNLQ96NB1 174 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 MRPL40Q9NQ50 206 aaKnown RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 ADA2Q9NZK5 511 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 CROTQ9UKG9 612 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 LSM1O15116 133 aaKnown RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 ANGPT2O15123 496 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 CATP04040 527 aaKnown RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 ME2P23368 584 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 PTDSS1P48651 473 aaKnown RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 SESN3P58005 492 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 CEACAM7Q14002 265 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ZXDCQ2QGD7 858 aaPredicted RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 BLOC1S3Q6QNY0 202 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 TRAPPC5Q8IUR0 188 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.51■□□□□ 0.55
USP39-202ENST00000409025 HBEGFQ99075 208 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 TACO1Q9BSH4 297 aaKnown RBP18.51■□□□□ 0.55
USP39-202ENST00000409025 DNAJC11Q9NVH1 559 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 TMEM45AQ9NWC5 275 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 LMCD1Q9NZU5 365 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ZIM2Q9NZV7 527 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 BCAP29Q9UHQ4 241 aa18.51■□□□□ 0.55
USP39-202ENST00000409025 ARHGEF33A8MVX0 844 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 MANBAO00462 879 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 LIN7AO14910 233 aaPredicted RBP18.5■□□□□ 0.55
USP39-202ENST00000409025 AP1G1O43747 822 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 VEGFDO43915 354 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 SLC22A3O75751 556 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 KRT6AP02538 564 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 KRT6BP04259 564 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 EPORP19235 508 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 C5AR1P21730 350 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 BMP8BP34820 402 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 GCKP35557 465 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 TIE1P35590 1138 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 KRT6CP48668 564 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 SEC13P55735 322 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 KCNK10P57789 538 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 AP5B1Q2VPB7 878 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 VPS26BQ4G0F5 336 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 CACUL1Q86Y37 369 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 AADATQ8N5Z0 425 aa18.5■□□□□ 0.55
USP39-202ENST00000409025 LILRA3Q8N6C8 439 aaPredicted RBP18.5■□□□□ 0.55
USP39-202ENST00000409025 SLC26A7Q8TE54 656 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms