RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 PHF19Q5T6S3 580 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 CAPRIN2Q6IMN6 1127 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 TRMT10BQ6PF06 316 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 ZNF574Q6ZN55 896 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 PROSER1Q86XN7 944 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 SLITRK4Q8IW52 837 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 LMNTD2Q8IXW0 634 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 WDR36Q8NI36 951 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 FAM76AQ8TAV0 307 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 DCAKDQ8WVC6 231 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 ZCCHC14Q8WYQ9 949 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 ZBTB9Q96C00 473 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 C12orf66Q96MD2 445 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 DPYSL5Q9BPU6 564 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 SEMA6CQ9H3T2 930 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 EPB41L1Q9H4G0 881 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 POLR1BQ9H9Y6 1135 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 C20orf96Q9NUD7 363 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 SATB2Q9UPW6 733 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 CFAP20Q9Y6A4 193 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 IGF2RP11717 2491 aa17.07■□□□□ 0.32
SMIM11A-202ENST00000399295 CCDC187A0A096LP49 1063 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 PRMT5O14744 637 aaPredicted RBP17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 PFDN6O15212 129 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 KRT37O76014 449 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 KRT38O76015 456 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 CSF2RBP32927 897 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 GABREP78334 506 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 CFHR1Q03591 330 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 ILF2Q12905 390 aaKnown RBP17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 RPA4Q13156 261 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 EIF3IQ13347 325 aaKnown RBP17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 GPR18Q14330 331 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 EFTUD2Q15029 972 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 TMED2Q15363 201 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 C3orf38Q5JPI3 329 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 NEPROQ6NW34 567 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 TMEM71Q6P5X7 295 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 IGF2-ASQ6U949 168 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 KCNMB4Q86W47 210 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 OR4D9Q8NGE8 314 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 GPR150Q8NGU9 434 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 CALML6Q8TD86 181 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 NCSTNQ92542 709 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 ELMO1Q92556 727 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 MTBPQ96DY7 904 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 LIN37Q96GY3 246 aaPredicted RBP17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 RMDN2Q96LZ7 410 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 TCF12Q99081 682 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 CPNE1Q99829 537 aa17.06■□□□□ 0.32
SMIM11A-202ENST00000399295 IGHV5-10-1A0A0J9YXX1 117 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 A0A1W2PNU3 283 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 IFRD1O00458 451 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 LIN7AO14910 233 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 UBXN7O94888 489 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 TYRP1P17643 537 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 AMD1P17707 334 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 KRT15P19012 456 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 MPSTP25325 297 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 PDHA2P29803 388 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 PREPP48147 710 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 LIMK2P53671 638 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 MAGOHP61326 146 aaKnown RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 THOC5Q13769 683 aaKnown RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 KRT33BQ14525 404 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 FOXR1Q6PIV2 292 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 WDR74Q6RFH5 385 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 RAB11FIP2Q7L804 512 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 FAM167BQ9BTA0 163 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 TSSK1BQ9BXA7 367 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 OR52A5Q9H2C5 316 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 SMYD2Q9NRG4 433 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 IL1RAPL1Q9NZN1 696 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 TMEM9Q9P0T7 183 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 CTNNAL1Q9UBT7 734 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 TBK1Q9UHD2 729 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 ZMIZ1Q9ULJ6 1067 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 COLEC10Q9Y6Z7 277 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 APC2O95996 2303 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 COL27A1Q8IZC6 1860 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 FREM2Q5SZK8 3169 aa17.05■□□□□ 0.32
SMIM11A-202ENST00000399295 UBA6A0AVT1 1052 aaPredicted RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 CXorf49A8MYA2 514 aaPredicted RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 PLD2O14939 933 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 BRINP1O60477 761 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 DXOO77932 396 aaKnown RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 SNRPAP09012 282 aaKnown RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 ERVK-10P10266 1014 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 ITGB6P18564 788 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 NR1D1P20393 614 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 OGNP20774 298 aaKnown RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 GP5P40197 560 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 CD151P48509 253 aa17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 CSE1LP55060 971 aaKnown RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 PLOD1Q02809 727 aaPredicted RBP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 TRA2AQ13595 282 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMIM11A-202ENST00000399295 BOP1Q14137 746 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms