RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PRSS42Q7Z5A4 293 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 OOSP2Q86WS3 158 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 LRRC6Q86X45 466 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CFAP61Q8NHU2 1237 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PANX3Q96QZ0 392 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 EBNA1BP2Q99848 306 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 WDR83Q9BRX9 315 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZNF768Q9H5H4 540 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FBXO6Q9NRD1 293 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CIDEBQ9UHD4 219 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ACSL6Q9UKU0 697 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PLAGL1Q9UM63 463 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TDRKHQ9Y2W6 561 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CHD6Q8TD26 2715 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 BTN3A1O00481 513 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RAD51CO43502 376 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLCO2B1O94956 709 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ERVK-10P10266 1014 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KPNA2P52292 529 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ADARP55265 1226 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FOXM1Q08050 763 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KCNAB1Q14722 419 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DCAF12Q5T6F0 453 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ARMC6Q6NXE6 501 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 OTOAQ7RTW8 1153 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KCNMB4Q86W47 210 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PDIK1LQ8N165 341 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 OR5K2Q8NHB8 316 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KLHL6Q8WZ60 621 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DPH1Q9BZG8 443 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DPH5Q9H2P9 285 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TRIT1Q9H3H1 467 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TFB2MQ9H5Q4 396 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PLAC1Q9HBJ0 212 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SIDT1Q9NXL6 827 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ICKQ9UPZ9 632 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CHMP2BQ9UQN3 213 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RUVBL2Q9Y230 463 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PCDHGA3Q9Y5H0 932 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZFYVE26Q68DK2 2539 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GSAPA4D1B5 854 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PFDN6O15212 129 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 HAUS5O94927 633 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ESR1P03372 595 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PKMP14618 531 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 NELFEP18615 380 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CHRM3P20309 590 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ELK3P41970 407 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MPP1Q00013 466 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SRSF6Q13247 344 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 HIF1AQ16665 826 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 AMIGO1Q86WK6 493 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TBC1D21Q8IYX1 336 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 LMNTD1Q8N9Z9 388 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 OR6C1Q96RD1 312 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ERP44Q9BS26 406 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DDA1Q9BW61 102 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ASPSCR1Q9BZE9 553 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CPNE5Q9HCH3 593 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FBXO8Q9NRD0 319 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 INTS10Q9NVR2 710 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 NFS1Q9Y697 457 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PTPRQQ9UMZ3 2332 aa13.68□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SDK2Q58EX2 2172 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ADAMTS20P59510 1910 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 POLR1CO15160 346 aaPredicted RBP13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 LIPCP11150 499 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PRDX3P30048 256 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RAB15P59190 212 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PRKAA1Q13131 559 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FASTKD3Q14CZ7 662 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TMED2Q15363 201 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZNF549Q6P9A3 640 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CNSTQ6PJW8 725 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 UNC5AQ6ZN44 842 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DTX1Q86Y01 620 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ANKMY2Q8IV38 441 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SKA2Q8WVK7 121 aaPredicted RBP13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 UBXN4Q92575 508 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZNF592Q92610 1267 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CFAP36Q96G28 342 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ELMO2Q96JJ3 720 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLC41A2Q96JW4 573 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLC30A3Q99726 388 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 B3GNT4Q9C0J1 378 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLC17A6Q9P2U8 582 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FBXO5Q9UKT4 447 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 POMT2Q9UKY4 750 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MED16Q9Y2X0 877 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TEX264Q9Y6I9 313 aa13.67□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms