RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TLR10Q9BXR5 811 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 ADNPQ9H2P0 1102 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 TFB2MQ9H5Q4 396 aaKnown RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 EIF2B3Q9NR50 452 aaKnown RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 C1GALT1Q9NS00 363 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 SOHLH2Q9NX45 425 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 SLC2A6Q9UGQ3 507 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 KCND3Q9UK17 655 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 CROTQ9UKG9 612 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PADI1Q9ULC6 663 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 TCAF1Q9Y4C2 921 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PCDHB3Q9Y5E6 796 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PRSS21Q9Y6M0 314 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 AP3B1O00203 1094 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 CEP104O60308 925 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 TIAF1O95411 115 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 TUBB4BP68371 445 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 BASP1P80723 227 aaKnown RBP13.02□□□□□ -0.33
VCX3A-202ENST00000398729 FOXK1P85037 733 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 PRKG2Q13237 762 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 TUBB2AQ13885 445 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 BOP1Q14137 746 aaKnown RBP13.02□□□□□ -0.33
VCX3A-202ENST00000398729 BRD3Q15059 726 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 SYTL3Q4VX76 610 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 FASTKD1Q53R41 847 aaKnown RBP13.02□□□□□ -0.33
VCX3A-202ENST00000398729 PCID2Q5JVF3 399 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 PWWP2BQ6NUJ5 590 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 C16orf46Q6P387 395 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 OR8K5Q8NH50 307 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 SGSM3Q96HU1 749 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 ZNF778Q96MU6 729 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 PSMG3-AS1Q96PY0 264 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 HGH1Q9BTY7 390 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 LHX9Q9NQ69 397 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 ASF1AQ9Y294 204 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 BTRCQ9Y297 605 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.33
VCX3A-202ENST00000398729 SLC9B1P1A6NJY1 282 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 BTN3A3O00478 584 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 BTN3A1O00481 513 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 MAP3K7O43318 606 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 OR1I1O60431 355 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 KATNA1O75449 491 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 F8A1P23610 371 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 OAS2P29728 719 aaKnown RBP13.01□□□□□ -0.33
VCX3A-202ENST00000398729 PRDX3P30048 256 aaKnown RBP13.01□□□□□ -0.33
VCX3A-202ENST00000398729 CXCR5P32302 372 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 KCNJ1P48048 391 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 POLE2P56282 527 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 SESN2P58004 480 aaPredicted RBP13.01□□□□□ -0.33
VCX3A-202ENST00000398729 GPR19Q15760 415 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 AARS2Q5JTZ9 985 aaKnown RBP13.01□□□□□ -0.33
VCX3A-202ENST00000398729 FBXO38Q6PIJ6 1188 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 TMEM126BQ8IUX1 230 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 TBC1D21Q8IYX1 336 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 PPM1MQ96MI6 270 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 TSSK1BQ9BXA7 367 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 IL22Q9GZX6 179 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 FANCEQ9HB96 536 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 KCND1Q9NSA2 647 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 BFARQ9NZS9 450 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 POLG2Q9UHN1 485 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 TUBD1Q9UJT1 453 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 MAN2B2Q9Y2E5 1009 aa13.01□□□□□ -0.33
VCX3A-202ENST00000398729 MRPS18BQ9Y676 258 aaKnown RBP13.01□□□□□ -0.33
VCX3A-202ENST00000398729 SLC5A10A0PJK1 596 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 C21orf140B9A014 251 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 KDM1AO60341 852 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 CPNE3O75131 537 aaKnown RBP13□□□□□ -0.33
VCX3A-202ENST00000398729 SCRG1O75711 98 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 ACADLP28330 430 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 SHMT2P34897 504 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 NPY2RP49146 381 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 KCNAB2Q13303 367 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 DNASE1L3Q13609 305 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 DEFB109BQ30KR1 87 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 ZNF534Q76KX8 674 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 HOOK3Q86VS8 718 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 OR5AR1Q8NGP9 310 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 CT55Q8WUE5 264 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 APOBEC4Q8WW27 367 aaKnown RBP13□□□□□ -0.33
VCX3A-202ENST00000398729 ZNF501Q96CX3 271 aaPredicted RBP13□□□□□ -0.33
VCX3A-202ENST00000398729 PITPNM3Q9BZ71 974 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 XKR8Q9H6D3 395 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 SYTL2Q9HCH5 934 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 LATS2Q9NRM7 1088 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 CATSPERZQ9NTU4 200 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 ACTR10Q9NZ32 417 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 PCDHGA6Q9Y5G7 932 aa13□□□□□ -0.33
VCX3A-202ENST00000398729 TEP1Q99973 2627 aaKnown RBP13□□□□□ -0.33
VCX3A-202ENST00000398729 PIPSLA2A3N6 862 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
VCX3A-202ENST00000398729 CD3EAPO15446 510 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms