RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ENO2P09104 434 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 XRCC1P18887 633 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 MTPNP58546 118 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 STX4Q12846 297 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 STEAP4Q687X5 459 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 NAPRTQ6XQN6 538 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CELF5Q8N6W0 485 aaKnown RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 NUS1Q96E22 293 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 MRGPRX2Q96LB1 330 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 DUSP26Q9BV47 211 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 ARHGAP39Q9C0H5 1083 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PCDHAC1Q9H158 963 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 KLHL1Q9NR64 748 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CNOT6Q9ULM6 557 aaKnown RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 MAP4K5Q9Y4K4 846 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PCDHGB3Q9Y5G1 929 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 MYO9BQ13459 2157 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CENPXA8MT69 81 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 ADAMDEC1O15204 470 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 GJB5O95377 273 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 NR2F6P10588 404 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 ADH5P11766 374 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CTSKP43235 329 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CAMKK1Q8N5S9 505 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PXYLP1Q8TE99 480 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 LCN9Q8WX39 176 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 SLC29A3Q9BZD2 475 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 AKAP7Q9P0M2 348 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 UPK3BL1B0FP48 263 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 UPK3BL2E5RIL1 263 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 STX16-NPEPL1H3BU86 382 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 STX16O14662 325 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 BCKDKO14874 412 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 SLC31A1O15431 190 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 LEPRP48357 1165 aaKnown RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 AQP4P55087 323 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 LSM3P62310 102 aaKnown RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PLEKHG6Q3KR16 790 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PTCHD4Q6ZW05 846 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 FGD2Q7Z6J4 655 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 SVOPLQ8N434 492 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 IGSF8Q969P0 613 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 LMAN2LQ9H0V9 348 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 TNFRSF11BO00300 401 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 SOCS5O75159 536 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 SEC24AO95486 1093 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 HIST1H2ABP04908 130 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 EDN1P05305 212 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 RAP2AP10114 183 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 TAS2R41P59536 307 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CDHR3Q6ZTQ4 885 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 HIST3H2AQ7L7L0 130 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZDHHC14Q8IZN3 488 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 HIST1H2ACQ93077 130 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 PGAP3Q96FM1 320 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZBTB26Q9HCK0 441 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 CRNNQ9UBG3 495 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 VPS29Q9UBQ0 182 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 OR6B1O95007 311 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 ATP1B2P14415 290 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 HSD17B2P37059 387 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 FRG2Q64ET8 278 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 KLHL23Q8NBE8 558 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 FRG2BQ96QU4 278 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 ADI1Q9BV57 179 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 PALMDQ9NP74 551 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZNF282Q9UDV7 671 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 MTX2O75431 263 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 TYRP14679 529 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 OLR1P78380 273 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 PTPRCAPQ14761 206 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 PARGQ86W56 976 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 DENND1AQ8TEH3 1009 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 RASSF5Q8WWW0 418 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 HDHD2Q9H0R4 259 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 SLITRK2Q9H156 845 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 COQ10BQ9H8M1 238 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 DDX60Q8IY21 1712 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 USP54Q70EL1 1684 aa13.96□□□□□ -0.17
PCDHGA11-201ENST00000398587 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 NDUFB5O43674 189 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 RASGRP1O95267 797 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 LRRC66Q68CR7 880 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 GALNT5Q7Z7M9 940 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZDHHC21Q8IVQ6 265 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 TXNDC5Q8NBS9 432 aaKnown RBP13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 TOP1MTQ969P6 601 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 PLGRKTQ9HBL7 147 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 BACE2Q9Y5Z0 518 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 WNT6Q9Y6F9 365 aa13.96□□□□□ -0.18
PCDHGA11-201ENST00000398587 EME2A4GXA9 379 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 M0QZQ0 153 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC35G6P0C7Q6 338 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 ETS2P15036 469 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms