RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PLEKHS1Q5SXH7 462 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 VWA5B1Q5TIE3 1220 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 OR52E8Q6IFG1 317 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 C16orf89Q6UX73 402 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 IZUMO2Q6UXV1 221 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 FRMD7Q6ZUT3 714 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 ACAD11Q709F0 780 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 PIWIL4Q7Z3Z4 852 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 DEFB107AQ8IZN7 70 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 MYO1HQ8N1T3 1032 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 RP9Q8TA86 221 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 STAG3L4Q8TBR4 150 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 FUBP1Q96AE4 644 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 ZNF514Q96K75 400 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 DLGAP2Q9P1A6 1054 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 BCAP29Q9UHQ4 241 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 POMPQ9Y244 141 aa18.93■□□□□ 0.62
PDLIM2-204ENST00000397760 GOLGA8QA0A0J9YX86 632 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 GOLGA8OA6NCC3 632 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 GOLGA8NF8WBI6 632 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 LATO43561 262 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 PEX1O43933 1283 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 LILRB5O75023 590 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 BAG2O95816 211 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 CXCL12P48061 93 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 SIGLEC14Q08ET2 396 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 CUL3Q13618 768 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 CCNIQ14094 377 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 CAMKK1Q8N5S9 505 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 FRMD1Q8N878 549 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 DENND6BQ8NEG7 585 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 TRAPPC9Q96Q05 1148 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 ATOH8Q96SQ7 321 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 APOOQ9BUR5 198 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 GPR174Q9BXC1 333 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 FAM192AQ9GZU8 254 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 RNF112Q9ULX5 631 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 GPR34Q9UPC5 381 aa18.92■□□□□ 0.62
PDLIM2-204ENST00000397760 IGHV1OR15-9A0A0B4J2B8 117 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 C10orf142B7Z368 130 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 CASQ2O14958 399 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 NPHS1O60500 1241 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 MYCLP1P12525 358 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 HNRNPA2B1P22626 353 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 ATP5F1P24539 256 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 CCR5P51681 352 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 CDC16Q13042 620 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 GBX1Q14549 363 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 SH2D4BQ5SQS7 431 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 KIAA0895LQ68EN5 471 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 CYHR1Q6ZMK1 362 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 TMEM126BQ8IUX1 230 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 ASZ1Q8WWH4 475 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 FOXJ1Q92949 421 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 EXT2Q93063 718 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 FAM8A1Q9UBU6 413 aa18.91■□□□□ 0.62
PDLIM2-204ENST00000397760 NEMP2A6NFY4 417 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 TMEM202A6NGA9 273 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 EIF3FO00303 357 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 FPGTO14772 594 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 NUAK1O60285 661 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 KERAO60938 352 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 ENO3P13929 434 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 PBLDP30039 288 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 CLDN2P57739 230 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 IRX1P78414 480 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 CRTC3Q6UUV7 619 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 ZNF547Q8IVP9 402 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 FAM160A2Q8N612 972 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 MAPK15Q8TD08 544 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 EDAQ92838 391 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 IER2Q9BTL4 223 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 ZNF385DQ9H6B1 395 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 CCDC189A1A4V9 331 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 POM121BA6NF01 834 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 E9PBE3 544 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 KLHL41O60662 606 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 GPC4O75487 556 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 POP7O75817 140 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 PDGFBP01127 241 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 IGHV4-34P06331 123 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 PIM1P11309 404 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 AKT2P31751 481 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 DNAJB13P59910 316 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 SYTL3Q4VX76 610 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 CWF19L1Q69YN2 538 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 PDSS2Q86YH6 399 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 VRK3Q8IV63 474 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 LINC00615Q96LM1 132 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 CA5BQ9Y2D0 317 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 PRKAB1Q9Y478 270 aa18.9■□□□□ 0.62
PDLIM2-204ENST00000397760 SYCE1LA8MT33 242 aa18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 A8MT66 165 aa18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 UBXN8O00124 270 aa18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 CACNB4O00305 520 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 PI15O43692 258 aa18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 SMIM24O75264 130 aa18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 SKAP2O75563 359 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 PIK3R1P27986 724 aa18.89■□□□□ 0.61
PDLIM2-204ENST00000397760 ARL13AQ5H913 290 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms