RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 UGT1A1P22309 533 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UGT1A4P22310 534 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 HSD17B3P37058 310 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CASRP41180 1078 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CHRNA4P43681 627 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CAPZBP47756 277 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CTSCP53634 463 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 TMEM115Q12893 351 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 ERV3-1Q14264 604 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 KCNAB1Q14722 419 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 PTPRCAPQ14761 206 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CASP8Q14790 479 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 KYNUQ16719 465 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 PCID2Q5JVF3 399 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 DENND5AQ6IQ26 1287 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 FAM83HQ6ZRV2 1179 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 LRRTM4Q86VH4 590 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 TTC30BQ8N4P2 665 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 GPR150Q8NGU9 434 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 APOBEC4Q8WW27 367 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 KIAA1143Q96AT1 154 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 SIGLEC10Q96LC7 697 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 EBNA1BP2Q99848 306 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CCDC77Q9BR77 488 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 ACBD3Q9H3P7 528 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 ZNF768Q9H5H4 540 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 VPS37BQ9H9H4 285 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UCK1Q9HA47 277 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UGT1A7Q9HAW7 530 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UGT1A10Q9HAW8 530 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UGT1A8Q9HAW9 530 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 PIH1D1Q9NWS0 290 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 SYBUQ9NX95 663 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 NINJ2Q9NZG7 142 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CHMP2BQ9UQN3 213 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 PLAAQ9Y263 795 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 KCNMB2Q9Y691 235 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 TNRC6AQ8NDV7 1962 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 A0A087WUV0 522 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-202ENST00000396828 IGHV5-51A0A0C4DH38 117 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 HEATR9A2RTY3 570 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 GPR89AB7ZAQ6 455 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 GAPDHSO14556 408 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-202ENST00000396828 RIPK2O43353 540 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 ATP8B1O43520 1251 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 RASSF9O75901 435 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 DNAJB5O75953 348 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 ACSL3O95573 720 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 PDGFAP04085 211 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 GPR89BP0CG08 455 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 AMD1P17707 334 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 TPH1P17752 444 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 ADRA1DP25100 572 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 IFFO1Q0D2I5 559 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 SEPT6Q14141 434 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 MAP7Q14244 749 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 FASTKD3Q14CZ7 662 aaKnown RBP10.09□□□□□ -0.79
NEDD8-202ENST00000396828 CACHD1Q5VU97 1274 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 PDPK2PQ6A1A2 396 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 IRGCQ6NXR0 463 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 FAM199XQ6PEV8 388 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-202ENST00000396828 C6orf15Q6UXA7 325 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-202ENST00000396828 C3orf62Q6ZUJ4 267 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 MICALCLQ6ZW33 695 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 NLRP9Q7RTR0 991 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 TRAPPC5Q8IUR0 188 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 TRIM48Q8IWZ4 208 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 ESX1Q8N693 406 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 BEND7Q8N7W2 519 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-202ENST00000396828 RASGEF1AQ8N9B8 481 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 KLHL6Q8WZ60 621 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 CFAP36Q96G28 342 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 VPS35Q96QK1 796 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 RANBP9Q96S59 729 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 EPB41L1Q9H4G0 881 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 VIPAS39Q9H9C1 493 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 IL26Q9NPH9 171 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 HACD3Q9P035 362 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 PSMD13Q9UNM6 376 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 TP53TG5Q9Y2B4 290 aa10.09□□□□□ -0.79
NEDD8-202ENST00000396828 FAM237BA0A1B0GVD1 139 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 CLEC18AA5D8T8 446 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 VEGFDO43915 354 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 KATNA1O75449 491 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 POP7O75817 140 aaKnown RBP10.08□□□□□ -0.8
NEDD8-202ENST00000396828 CRTAMO95727 393 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 ABHD2P08910 425 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 FGF5P12034 268 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 FOLR1P15328 257 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 NELFEP18615 380 aaKnown RBP10.08□□□□□ -0.8
NEDD8-202ENST00000396828 PAMP19021 973 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 IDSP22304 550 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 STX2P32856 288 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 HMGCLP35914 325 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 MLLT10P55197 1068 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 EIF3BP55884 814 aaKnown RBP10.08□□□□□ -0.8
NEDD8-202ENST00000396828 CRADDP78560 199 aa10.08□□□□□ -0.8
NEDD8-202ENST00000396828 PDE1BQ01064 536 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms