RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PCDHGA6Q9Y5G7 932 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 RELNP78509 3460 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF106Q9H2Y7 1883 aaKnown RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 UBA6A0AVT1 1052 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 KRT87PA6NCN2 255 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ERI2A8K979 691 aaKnown RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 GPC4O75487 556 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ZNF189O75820 626 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ZBTB11O95625 1053 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 FGGP02679 453 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 APRTP07741 180 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 F7P08709 466 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 RALBP11234 206 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 NR1D1P20393 614 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ADRA1DP25100 572 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 NDUFS1P28331 727 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 NMBRP28336 390 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 RORAP35398 523 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 NSG1P42857 185 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 LMAN1P49257 510 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 SESN2P58004 480 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 TUBB4BP68371 445 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 MC1RQ01726 317 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 RPA4Q13156 261 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 DNASE1L3Q13609 305 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 IL10RAQ13651 578 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 TUBB2AQ13885 445 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ERV3-1Q14264 604 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 GSE1Q14687 1217 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 SKIDA1Q1XH10 827 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 CRTC2Q53ET0 693 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 C4orf17Q53FE4 359 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ANKRD22Q5VYY1 191 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 KLHL35Q6PF15 583 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 CES3Q6UWW8 571 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 UNC5AQ6ZN44 842 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 CDHR3Q6ZTQ4 885 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 LINC00523Q86TU6 105 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 ATCAYQ86WG3 371 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 OOSP2Q86WS3 158 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 KMT5CQ86Y97 462 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 KRT222Q8N1A0 295 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 AGGF1Q8N302 714 aaeCLIP8.58□□□□□ -1.043e-7■■■■□ 19.7
ATG4A-205ENST00000394892 FAM26EQ8N5C1 309 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 DNAAF3Q8N9W5 541 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 LINC01555Q8NAE3 123 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 OR4L1Q8NH43 312 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 APOBEC4Q8WW27 367 aaKnown RBP8.58□□□□□ -1.04
ATG4A-205ENST00000394892 SGSM3Q96HU1 749 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 OR2A14Q96R47 310 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 TUBB2BQ9BVA1 445 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 TRIM55Q9BYV6 548 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 EPN3Q9H201 632 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 CHST8Q9H2A9 424 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 SRMSQ9H3Y6 488 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 MVB12BQ9H7P6 319 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 LRRC4CQ9HCJ2 640 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 KCND1Q9NSA2 647 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 PAK5Q9P286 719 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 CIDEBQ9UHD4 219 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 RARRES3Q9UL19 164 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 PADI1Q9ULC6 663 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 PPP2R2CQ9Y2T4 447 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 NEU2Q9Y3R4 380 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 KCNMB2Q9Y691 235 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 COLEC10Q9Y6Z7 277 aa8.58□□□□□ -1.04
ATG4A-205ENST00000394892 HEATR9A2RTY3 570 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 LIN7AO14910 233 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-205ENST00000394892 CEP104O60308 925 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 AVILO75366 819 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 KATNA1O75449 491 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 CREG1O75629 220 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 UGT2B7P16662 529 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 TCN2P20062 427 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 CSE1LP55060 971 aaKnown RBP8.57□□□□□ -1.04
ATG4A-205ENST00000394892 FOXL2P58012 376 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 ACY1Q03154 408 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 TRIP13Q15645 432 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-205ENST00000394892 CCSMST1Q4G0I0 132 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 AFTPHQ6ULP2 937 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 FAM198BQ6UWH4 519 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 PPP1R21Q6ZMI0 780 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 CAND1Q86VP6 1230 aaKnown RBP8.57□□□□□ -1.04
ATG4A-205ENST00000394892 AMIGO1Q86WK6 493 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 REXO1L1PQ8IX06 675 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 TXLNBQ8N3L3 684 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 MPP5Q8N3R9 675 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 ELMO1Q92556 727 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 STAMBPL1Q96FJ0 436 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 MS4A14Q96JA4 679 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 IL17FQ96PD4 163 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 FCRL4Q96PJ5 515 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 AP1M1Q9BXS5 423 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 P2RY12Q9H244 342 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 ACTL8Q9H568 366 aa8.57□□□□□ -1.04
ATG4A-205ENST00000394892 PDE7BQ9NP56 450 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms