RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 RAB44Q7Z6P3 723 aaPredicted RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 ADAMTSL2Q86TH1 951 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 MOCOSQ96EN8 888 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 LGR4Q9BXB1 951 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 ZCCHC2Q9C0B9 1178 aaKnown RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 KLHL42Q9P2K6 505 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 KLF15Q9UIH9 416 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CNOT6Q9ULM6 557 aaKnown RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TMEM131Q92545 1883 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 A0A0G2JND7 137 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 SLC30A4O14863 429 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 SGTAO43765 313 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CHRNGP07510 517 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CBSLP0DN79 551 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CD59P13987 128 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 MTHFD2P13995 350 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 AOAHP28039 575 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CBSP35520 551 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CCR10P46092 362 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 PRLHRP49683 370 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 KIAA1024LP59773 190 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 DMTNQ08495 405 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 IFT88Q13099 833 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 BOP1Q14137 746 aaKnown RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 NFATC4Q14934 902 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 ADAMTSL4Q6UY14 1074 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 DBX2Q6ZNG2 339 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 FRA10AC1Q70Z53 315 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 PARGQ86W56 976 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 GPSM1Q86YR5 675 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 FBXO39Q8N4B4 442 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 OXR1Q8N573 874 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 BEND7Q8N7W2 519 aaPredicted RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 PIWIL2Q8TC59 973 aaKnown RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 ELMO1Q92556 727 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 L3HYPDHQ96EM0 354 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 RMDN2Q96LZ7 410 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TMEM120AQ9BXJ8 343 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 WDR26Q9H7D7 661 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TM7SF3Q9NS93 570 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 PNPOQ9NVS9 261 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TMCO1Q9UM00 188 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CEP250Q9BV73 2442 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 EIF3FO00303 357 aaPredicted RBP13.27□□□□□ -0.29
PTN-202ENST00000393083 KPNA5O15131 536 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 PCDHGA12O60330 932 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 ENO3P13929 434 aaPredicted RBP13.27□□□□□ -0.29
PTN-202ENST00000393083 MPSTP25325 297 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 SERPINB5P36952 375 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 THOP1P52888 689 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 ARFIP2P53365 341 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 CTSCP53634 463 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 CDK3Q00526 305 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 TMEM115Q12893 351 aaPredicted RBP13.27□□□□□ -0.29
PTN-202ENST00000393083 GTF2H3Q13889 308 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 PTK2BQ14289 1009 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 PFKFB4Q16877 469 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 RSPO4Q2I0M5 234 aaPredicted RBP13.27□□□□□ -0.29
PTN-202ENST00000393083 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 ARL13AQ5H913 290 aaPredicted RBP13.27□□□□□ -0.29
PTN-202ENST00000393083 C6orf89Q6UWU4 347 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 KANSL1Q7Z3B3 1105 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 HEATR4Q86WZ0 1026 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.29
PTN-202ENST00000393083 ZNF781Q8N8C0 355 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 NUDT4Q9NZJ9 180 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 RAP2CQ9Y3L5 183 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 PCDHGB2Q9Y5G2 931 aa13.27□□□□□ -0.29
PTN-202ENST00000393083 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 CABIN1Q9Y6J0 2220 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 TMEM202A6NGA9 273 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 NCF1BA6NI72 391 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 NCF1CA8MVU1 366 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 CACNB4O00305 520 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 SNX2O60749 519 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 CSF2P04141 144 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 S100BP04271 92 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 MYCLP1P12525 358 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 NCF1P14598 390 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 NME1P15531 152 aaKnown RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 IMPDH1P20839 514 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 HTR1BP28222 390 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 EPHA8P29322 1005 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 ARRB1P49407 418 aaPredicted RBP13.26□□□□□ -0.29
PTN-202ENST00000393083 CCT8P50990 548 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 HERVK_113P63132 956 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 HSPA14Q0VDF9 509 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 BNIP3Q12983 259 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 PRKAA1Q13131 559 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 GBX1Q14549 363 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 SYTL3Q4VX76 610 aa13.26□□□□□ -0.29
PTN-202ENST00000393083 PLEKHS1Q5SXH7 462 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms