RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 LRRC42Q9Y546 428 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CPSF4LA6NMK7 179 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 GNRH1P01148 92 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 GAD2Q05329 585 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 RBM48Q5RL73 367 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 USP43Q70EL4 1123 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 MTERF1Q99551 399 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 PKP2Q99959 881 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 KCNS3Q9BQ31 491 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TAS2R7Q9NYW3 318 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TVP23BQ9NYZ1 205 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CALML5Q9NZT1 146 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PFDN2Q9UHV9 154 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZDHHC2Q9UIJ5 367 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PPIEQ9UNP9 301 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 TMEM233B4DJY2 109 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 H3BSA7 217 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 FMO3P31513 532 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 OGDHQ02218 1023 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 BNIP3Q12983 259 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 SYT16Q17RD7 645 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 PGBD2Q6P3X8 592 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 OXCT2Q9BYC2 517 aaPredicted RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 MTRRQ9UBK8 725 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 CKLFQ9UBR5 152 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 ENPP3O14638 875 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 NIPSNAP2O75323 286 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 DNTTP04053 509 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 PRNPP04156 253 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 UGT1A6P19224 532 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 UGT1A1P22309 533 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 UGT1A4P22310 534 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 UGT1A3P35503 534 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 GSK3BP49841 420 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 RPL26P61254 145 aaKnown RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 PRR5P85299 388 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 HMGCS1Q01581 520 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 FAM91A1Q658Y4 838 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 CYP2U1Q7Z449 544 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 UBE2J2Q8N2K1 259 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 TNFAIP8L1Q8WVP5 186 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 CDKN2AIPNLQ96HQ2 116 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 RIMS1Q86UR5 1692 aaKnown RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 ZNF879B4DU55 563 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 AHSGP02765 367 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 CYP11A1P05108 521 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 ARFIP1P53367 373 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 FKBP1BP68106 108 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 NPTX1Q15818 432 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 BTN2A1Q7KYR7 527 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
LCA5-202ENST00000392959 CFL2Q9Y281 166 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 NFAT5O94916 1531 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
LCA5-202ENST00000392959 REM1O75628 298 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 SEMA3DO95025 777 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 PRPS1L1P21108 318 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 NT5EP21589 574 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 PRKCHP24723 683 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 AP3S2P59780 193 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 PLEKHG6Q3KR16 790 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 IQCCQ4KMZ1 466 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 CHST9Q7L1S5 443 aa12.9□□□□□ -0.35
LCA5-202ENST00000392959 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.35
LCA5-202ENST00000392959 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 PRKD3O94806 890 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 HCAR3P49019 387 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 FAM182AQ5T1J6 154 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 EPGNQ6UW88 154 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 RASSF6Q6ZTQ3 369 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 CADM2Q8N3J6 435 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 GPR22Q99680 433 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 PCDHGA10Q9Y5H3 936 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 MAGEB3O15480 346 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 MTRF1O75570 445 aaKnown RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 SMPD1P17405 629 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 RYKP34925 604 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 DSC3Q14574 896 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 SMCO1Q147U7 214 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 ZNF311Q5JNZ3 666 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 JAZF1Q86VZ6 243 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 OR10G2Q8NGC3 310 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 GRPEL2Q8TAA5 225 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms