RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NDUFS3O75489 264 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 SPAG6O75602 509 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 MT-ND3P03897 115 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 RPN2P04844 631 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 APOA4P06727 396 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 MLNP12872 115 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 FOLR1P15328 257 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
HMGN4-201ENST00000377575 ITGB6P18564 788 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 ACADLP28330 430 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 TUBB4BP68371 445 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 PRKG2Q13237 762 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 TUBB2AQ13885 445 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 KCNAB1Q14722 419 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 DNAJC21Q5F1R6 531 aaKnown RBP16.33■□□□□ 0.2
HMGN4-201ENST00000377575 PTRHD1Q6GMV3 140 aaKnown RBP16.33■□□□□ 0.2
HMGN4-201ENST00000377575 KIAA0930Q6ICG6 404 aaPredicted RBP16.33■□□□□ 0.2
HMGN4-201ENST00000377575 NAPRTQ6XQN6 538 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 SDCCAG8Q86SQ7 713 aaPredicted RBP16.33■□□□□ 0.2
HMGN4-201ENST00000377575 LDB1Q86U70 411 aaPredicted RBP16.33■□□□□ 0.2
HMGN4-201ENST00000377575 MCUQ8NE86 351 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 OR8K5Q8NH50 307 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 CPT1BQ92523 772 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 SLC45A3Q96JT2 553 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 PDLIM2Q96JY6 352 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 FGF21Q9NSA1 209 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 ATRXP46100 2492 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 LOC101059948A0A1B0GTJ6 334 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 BHMG1C9JSJ3 638 aaPredicted RBP16.32■□□□□ 0.2
HMGN4-201ENST00000377575 BTN3A3O00478 584 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 TMEM63AO94886 807 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 VAPBO95292 243 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 ZNF28P17035 718 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 RPS3P23396 243 aaKnown RBP eCLIP16.32■□□□□ 0.2
HMGN4-201ENST00000377575 CCR7P32248 378 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 CSE1LP55060 971 aaKnown RBP16.32■□□□□ 0.2
HMGN4-201ENST00000377575 HSPA14Q0VDF9 509 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 KCTD19Q17RG1 926 aaPredicted RBP16.32■□□□□ 0.2
HMGN4-201ENST00000377575 ANKRD22Q5VYY1 191 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 HOOK3Q86VS8 718 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 SLC22A15Q8IZD6 547 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 GALNT6Q8NCL4 622 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 GSDMBQ8TAX9 411 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 ARHGAP9Q9BRR9 750 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 SLC12A9Q9BXP2 914 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 ICKQ9UPZ9 632 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 TDRKHQ9Y2W6 561 aaKnown RBP16.32■□□□□ 0.2
HMGN4-201ENST00000377575 RPS6KL1Q9Y6S9 549 aa16.32■□□□□ 0.2
HMGN4-201ENST00000377575 KPNA5O15131 536 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 ZNF185O15231 689 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 AVILO75366 819 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 PRB1P04280 392 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 CCNYL3P0C7X3 344 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 OGNP20774 298 aaKnown RBP16.31■□□□□ 0.2
HMGN4-201ENST00000377575 ARNTP27540 789 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 PRDX3P30048 256 aaKnown RBP16.31■□□□□ 0.2
HMGN4-201ENST00000377575 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
HMGN4-201ENST00000377575 MC1RQ01726 317 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 C19orf57Q0VDD7 668 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 PPP1R7Q15435 360 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 CES3Q6UWW8 571 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 CAND1Q86VP6 1230 aaKnown RBP16.31■□□□□ 0.2
HMGN4-201ENST00000377575 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 UNC5BQ8IZJ1 945 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 LKAAEAR1Q8TD35 194 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 EXTL1Q92935 676 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 CATSPER2Q96P56 530 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 SERPINB12Q96P63 405 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 TCF12Q99081 682 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 PITPNM3Q9BZ71 974 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 P2RY12Q9H244 342 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 XKR8Q9H6D3 395 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 SYTL2Q9HCH5 934 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 ACTR10Q9NZ32 417 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 OR6C2Q9NZP2 312 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 VPS9D1Q9Y2B5 631 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 NEU2Q9Y3R4 380 aa16.31■□□□□ 0.2
HMGN4-201ENST00000377575 SNRNP200O75643 2136 aaKnown RBP16.3■□□□□ 0.2
HMGN4-201ENST00000377575 FAM237BA0A1B0GVD1 139 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 MAGEB16A2A368 324 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 PIPSLA2A3N6 862 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 SLC9B1P1A6NJY1 282 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 SDR42E2A6NKP2 422 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 IQCF5A8MTL0 148 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 GOLGA8MH3BSY2 632 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 CPNE3O75131 537 aaKnown RBP16.3■□□□□ 0.2
HMGN4-201ENST00000377575 GPC4O75487 556 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 AOAHP28039 575 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 DLSTP36957 453 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 CYP4F2P78329 520 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 LY6DQ14210 128 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 GPR19Q15760 415 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 PWWP2BQ6NUJ5 590 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 SPESP1Q6UW49 350 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 UNC5DQ6UXZ4 953 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 OTOAQ7RTW8 1153 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 TMEM126BQ8IUX1 230 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 DCUN1D3Q8IWE4 304 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms