RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 EMX2Q04743 252 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 C8orf82Q6P1X6 216 aaPredicted RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 SBSNQ6UWP8 590 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP11-204ENST00000377107 R3HCC1LQ7Z5L2 792 aaKnown RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 PROSER1Q86XN7 944 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 NPAS4Q8IUM7 802 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 GIPC3Q8TF64 312 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 NRBF2Q96F24 287 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 MED8Q96G25 268 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 YIPF1Q9Y548 306 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 MYO16Q9Y6X6 1858 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 OR2AG2A6NM03 316 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CXCR6O00574 342 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 LSM1O15116 133 aaKnown RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 XPNPEP2O43895 674 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 XYLBO75191 536 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 SLC10A3P09131 477 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 AGXTP21549 392 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 GABRR2P28476 465 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 NAA20P61599 178 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 NFATC2Q13469 925 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 PWP1Q13610 501 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 ZCCHC8Q6NZY4 707 aaKnown RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 NCEH1Q6PIU2 408 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 BEND7Q8N7W2 519 aaPredicted RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 PEX13Q92968 403 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 MTERF1Q99551 399 aaKnown RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 PCDH12Q9NPG4 1184 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 RASSF1Q9NS23 344 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CFAP97Q9P2B7 532 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CR2P20023 1033 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CCR3P51677 355 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CTBSQ01459 385 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 DAG1Q14118 895 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 SULT1C3Q6IMI6 304 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 UBE2R2Q712K3 238 aaPredicted RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 CMTM8Q8IZV2 173 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 TADA1Q96BN2 335 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 INPP5KQ9BT40 448 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 C2orf49Q9BVC5 232 aaPredicted RBP12.67□□□□□ -0.38
USP11-204ENST00000377107 UGT2B28Q9BY64 529 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 MITFO75030 526 aaPredicted RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 RAP2AP10114 183 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 CDH1P12830 882 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 BPIP17213 487 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 CTSOP43234 321 aaPredicted RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 ALDH3B2P48448 385 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ZXDBP98169 803 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ABRQ12979 859 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 XKR7Q5GH72 579 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 CCNYL2Q5T2Q4 361 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 DLEU7Q6UYE1 221 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 LMNTD1Q8N9Z9 388 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 CDK5RAP1Q96SZ6 601 aaKnown RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 CARS2Q9HA77 564 aaKnown RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 BCL10O95999 233 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ANXA5P08758 320 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 TACR1P25103 407 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 HMGCLP35914 325 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ITGADQ13349 1161 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ZNF366Q8N895 744 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 GPR156Q8NFN8 814 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 SPATA17Q96L03 361 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 OSBPL6Q9BZF3 934 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ACTL8Q9H568 366 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 RUBCNLQ9H714 662 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 SLC22A14Q9Y267 594 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 DLGAP4Q9Y2H0 992 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 H0YJX3 145 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 H3BMQ9 156 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 TMEM189-UBE2V1I3L0A0 370 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 TAPBPO15533 448 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 BMP10O95393 424 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 KRT6AP02538 564 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 KRT6BP04259 564 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 INHAP05111 366 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 HTR1EP28566 365 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 FMO3P31513 532 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 KRT6CP48668 564 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 TRAF3Q13114 568 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 KCNAB2Q13303 367 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 OR4F3Q6IEY1 312 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 DOK6Q6PKX4 331 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 THAP5Q7Z6K1 395 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 GPR180Q86V85 440 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 MFSD2AQ8NA29 543 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 FOXJ1Q92949 421 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 COG8Q96MW5 612 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 ZNF583Q96ND8 569 aa12.66□□□□□ -0.38
USP11-204ENST00000377107 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
USP11-204ENST00000377107 TBC1D23Q9NUY8 699 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms