RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 LMAN1P49257 510 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 IL10RAQ13651 578 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 ITIH4Q14624 930 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 PLEKHS1Q5SXH7 462 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 HOOK3Q86VS8 718 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 DSELQ8IZU8 1212 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 DNAAF3Q8N9W5 541 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 OR1L3Q8NH93 324 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 ATG4AQ8WYN0 398 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 ELMO1Q92556 727 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 TRIM55Q9BYV6 548 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 SLC7A5P2Q9GIP4 190 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 ACTR5Q9H9F9 607 aaPredicted RBP20.4■□□□□ 0.86
VSX1-201ENST00000376707 SERTAD3Q9UJW9 196 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 GUCA1BQ9UMX6 200 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 SNX7Q9UNH6 387 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 ARGFXA6NJG6 315 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 ERI2A8K979 691 aaKnown RBP20.39■□□□□ 0.85
VSX1-201ENST00000376707 LIASO43766 372 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 MSL3P1P0C860 447 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 PVRP15151 417 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 LAMB3Q13751 1172 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 CCDC38Q502W7 563 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 SEL1L2Q5TEA6 688 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 SLC13A5Q86YT5 568 aaPredicted RBP20.39■□□□□ 0.85
VSX1-201ENST00000376707 ADGRF3Q8IZF5 1079 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 ENDOVQ8N8Q3 282 aaKnown RBP20.39■□□□□ 0.85
VSX1-201ENST00000376707 OR52K1Q8NGK4 314 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.39■□□□□ 0.85
VSX1-201ENST00000376707 TRAPPC9Q96Q05 1148 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 KLHL25Q9H0H3 589 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 ACSS2Q9NR19 701 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 ACTR10Q9NZ32 417 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 ASF1AQ9Y294 204 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 PRSS21Q9Y6M0 314 aa20.39■□□□□ 0.85
VSX1-201ENST00000376707 HECTD1Q9ULT8 2610 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 CCDC162PA2VCL2 907 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 OR51F1A6NGY5 319 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 RAB40ALP0C0E4 278 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 RORAP35398 523 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 ITGA1P56199 1179 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 CDH17Q12864 832 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 CHAF1BQ13112 559 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 BRD3Q15059 726 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 SYTL3Q4VX76 610 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 CPZQ66K79 652 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 LCN10Q6JVE6 187 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 PACS1Q6VY07 963 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 ZNF662Q6ZS27 426 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 OR5AR1Q8NGP9 310 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 NLNQ9BYT8 704 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 PCMTD2Q9NV79 361 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 ICKQ9UPZ9 632 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 PLAAQ9Y263 795 aa20.38■□□□□ 0.85
VSX1-201ENST00000376707 E7EQ34 232 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 PDGFAP04085 211 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 OR56A5P0C7T3 313 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 FOXN2P32314 431 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 SHMT2P34897 504 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 CCL11P51671 97 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 PGDP52209 483 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 ZNF789Q5FWF6 425 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 MEI1Q5TIA1 1274 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 SPESP1Q6UW49 350 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 PPP1R21Q6ZMI0 780 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 SYTL1Q8IYJ3 562 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 N4BP2L2Q92802 583 aaPredicted RBP20.37■□□□□ 0.85
VSX1-201ENST00000376707 TTC1Q99614 292 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 SLC25A23Q9BV35 468 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 ING2Q9H160 280 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 POLG2Q9UHN1 485 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 TCFL5Q9UL49 500 aa20.37■□□□□ 0.85
VSX1-201ENST00000376707 TDRKHQ9Y2W6 561 aaKnown RBP20.37■□□□□ 0.85
VSX1-201ENST00000376707 HEATR9A2RTY3 570 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 E7EVH7 732 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 F8W8V4 182 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 SUN1O94901 812 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 IFNB1P01574 187 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 FDFT1P37268 417 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 PTGIRP43119 386 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 MLLT10P55197 1068 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 RPS6KA1Q15418 735 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 PTCHD3Q3KNS1 767 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 LYPLAL1Q5VWZ2 237 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 UNC5AQ6ZN44 842 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 CDHR3Q6ZTQ4 885 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 ATCAYQ86WG3 371 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 TBC1D21Q8IYX1 336 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 GPR135Q8IZ08 494 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 HDAC10Q969S8 669 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 ETNK1Q9HBU6 452 aa20.36■□□□□ 0.85
VSX1-201ENST00000376707 ZNF749O43361 778 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 HBQ1P09105 142 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 UGT2B7P16662 529 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 ACADLP28330 430 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 PLOD1Q02809 727 aaPredicted RBP20.35■□□□□ 0.85
VSX1-201ENST00000376707 UBAP2LQ14157 1087 aaKnown RBP20.35■□□□□ 0.85
VSX1-201ENST00000376707 AFTPHQ6ULP2 937 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 FAM198BQ6UWH4 519 aa20.35■□□□□ 0.85
VSX1-201ENST00000376707 NAPRTQ6XQN6 538 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms