RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 TRIM43BA6NCK2 446 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ASNA1O43681 348 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 CYP11A1P05108 521 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 COL6A1P12109 1028 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 CYP2A7P20853 494 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ITPKAP23677 461 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 RPIAP49247 311 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 PGFP49763 221 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ABRAXAS2Q15018 415 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 AMER2Q8N7J2 671 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 TTC29Q8NA56 475 aaPredicted RBP12.91□□□□□ -0.34
CUL4A-203ENST00000375441 KCNJ9Q92806 393 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 CCNB1IP1Q9NPC3 277 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
CUL4A-203ENST00000375441 SHROOM3Q8TF72 1996 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 A0A1B0GVM2 712 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 C5orf58C9J3I9 102 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ZSCAN9O15535 394 aaPredicted RBP12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ALOX5P09917 674 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 SOX6P35712 828 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 PSMD8P48556 350 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 FCGRTP55899 365 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 SMAD3P84022 425 aaKnown RBP12.91□□□□□ -0.34
CUL4A-203ENST00000375441 RUNX1T1Q06455 604 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 RFTN2Q52LD8 501 aaPredicted RBP12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ZNF605Q86T29 641 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 ITIH5Q86UX2 942 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 EPHX4Q8IUS5 362 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 CNIH3Q8TBE1 160 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 TEX37Q96LM6 180 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 FOPNLQ96NB1 174 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 FUNDC2Q9BWH2 189 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 AMBNQ9NP70 447 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
CUL4A-203ENST00000375441 MROH6A6NGR9 719 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 LOC730098B7Z3J9 87 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 ATXN1LP0C7T5 689 aaKnown RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 LETMD1Q6P1Q0 360 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 UBE2R2Q712K3 238 aaPredicted RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 HEATR4Q86WZ0 1026 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 C2orf49Q9BVC5 232 aaPredicted RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 CEP44Q9C0F1 390 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 GIN1Q9NXP7 522 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 KIAA0100Q14667 2235 aaKnown RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 LOC285095A0A1B0GVY8 99 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 RPS17P08708 135 aaKnown RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 OR1D2P34982 312 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 KCNA10Q16322 511 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 TPGS1Q6ZTW0 290 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 SPRED1Q7Z699 444 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 TRUB1Q8WWH5 349 aaKnown RBP12.9□□□□□ -0.34
CUL4A-203ENST00000375441 PSKH2Q96QS6 385 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 COPS8Q99627 209 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 ABCD2Q9UBJ2 740 aa12.9□□□□□ -0.34
CUL4A-203ENST00000375441 GLYATL1P3A0A0U1RQE8 302 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 FUOMA2VDF0 154 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 MYADML2A6NDP7 307 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 CACNG3O60359 315 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 MATN1P21941 496 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 CRATP43155 626 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 SYT16Q17RD7 645 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 SPANXN2Q5MJ10 180 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 LDLRAD1Q5T700 205 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 RSBN1Q5VWQ0 802 aaPredicted RBP12.9□□□□□ -0.35
CUL4A-203ENST00000375441 PIANPQ8IYJ0 282 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 PIK3C3Q8NEB9 887 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 HMGCLL1Q8TB92 370 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.35
CUL4A-203ENST00000375441 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 EBPLQ9BY08 206 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 ATG10Q9H0Y0 220 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 OSER1Q9NX31 292 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 SNX8Q9Y5X2 465 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 MCM3APO60318 1980 aa12.9□□□□□ -0.35
CUL4A-203ENST00000375441 KRT75O95678 551 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 FABP3P05413 133 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 PLA2G16P53816 162 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 CD47Q08722 323 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 CES5AQ6NT32 575 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 NIPAL1Q6NVV3 410 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 PROKR1Q8TCW9 393 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 PYCR2Q96C36 320 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
CUL4A-203ENST00000375441 PCDHGA11Q9Y5H2 935 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 FPGTO14772 594 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 ERN1O75460 977 aaKnown RBP12.89□□□□□ -0.35
CUL4A-203ENST00000375441 IGSF6O95976 241 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 MTHFD2P13995 350 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 SERPINA4P29622 427 aa12.89□□□□□ -0.35
CUL4A-203ENST00000375441 CHI3L1P36222 383 aaPredicted RBP12.89□□□□□ -0.35
CUL4A-203ENST00000375441 VBP1P61758 197 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms