RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 HEPACAMQ14CZ8 416 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FAM111BQ6SJ93 734 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FEM1AQ9BSK4 669 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FNDC3AQ9Y2H6 1198 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 LRRN3E7EW58 273 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 LYPLA1O75608 230 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 HTR3BO95264 441 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FOXN2P32314 431 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MBTD1Q05BQ5 628 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 GRAPQ13588 217 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CLIP4Q8N3C7 705 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 RASGEF1AQ8N9B8 481 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 LRRN3Q9H3W5 708 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ERVK-5Q9HDB9 667 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TRPC4Q9UBN4 977 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 UBBP0CG47 229 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 UBCP0CG48 685 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 ZNF35P13682 527 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 HOXB1P14653 301 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 KDELR1P24390 212 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CDK2P24941 298 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PITPNBP48739 271 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 EPGNQ6UW88 154 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SLC16A9Q7RTY1 509 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CUZD1Q86UP6 607 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CACNG6Q9BXT2 260 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 RBCK1Q9BYM8 510 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ANKRD60Q9BZ19 345 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 NDUFB9Q9Y6M9 179 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PRORSD1PA6NEY8 169 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 UGT2B17O75795 530 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SCNN1DP51172 638 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SKP1P63208 163 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ACOT11Q8WXI4 607 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 AUTS2Q8WXX7 1259 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 WACQ9BTA9 647 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 DPCDQ9BVM2 203 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.376e-7■■■■□ 20.6
UBR4-204ENST00000375254 C14orf166Q9Y224 244 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 ADGRL1O94910 1474 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 OR6A2O95222 327 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MT-ND2P03891 347 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FGFR1P11362 822 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SLC11A2P49281 568 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 GPR143P51810 404 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 KCNT2Q6UVM3 1135 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ADAMTSL2Q86TH1 951 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 KCT2Q8NC54 265 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PSD4Q8NDX1 1056 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ELP5Q8TE02 316 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 NELL1Q92832 810 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CCDC120Q96HB5 630 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 HPDLQ96IR7 371 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 IL2RBP14784 551 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ADORA1P30542 326 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 OXA1LQ15070 435 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FAM69AQ5T7M9 428 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TXNDC15Q96J42 360 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TIGARQ9NQ88 270 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ALAS1P13196 640 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 NFYAP23511 347 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 CTNNB1P35222 781 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 SBK1Q52WX2 424 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SCGB1C1Q8TD33 95 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FAM126AQ9BYI3 521 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 VRTNQ9H8Y1 702 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SYNDIG1LA6NDD5 238 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CDC20Q12834 499 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 DYRK1AQ13627 763 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 IRF2BP2Q7Z5L9 587 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CCDC54Q8NEL0 328 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR4Q3Q8NH05 313 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 C16orf58Q96GQ5 468 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 TFP02787 698 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 FPR1P21462 350 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 GPR85P60893 370 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MTAPQ13126 283 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SIM2Q14190 667 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZNF670Q9BS34 389 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 BHLHE41Q9C0J9 482 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 LATO43561 262 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 KERAO60938 352 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 GIPRP48546 466 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CLCN4P51793 760 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZCCHC23Q6ZST2 131 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 HS6ST3Q8IZP7 471 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 DAW1Q8N136 415 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 DYNLL2Q96FJ2 89 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ASPNQ9BXN1 380 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 COMMD4Q9H0A8 199 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OPTCQ9UBM4 332 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MED16Q9Y2X0 877 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 FGD5Q6ZNL6 1462 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR1I1O60431 355 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 BCAS1O75363 584 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 RXRBP28702 533 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 HOXD11P31277 338 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms