RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 PYURFQ96I23 114 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 CNDP2Q96KP4 475 aaKnown RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 TM6SF2Q9BZW4 377 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 ZNF221Q9UK13 617 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 KRBA1A5PL33 1030 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 PLK4O00444 970 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 DNAJA1P31689 397 aaKnown RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 ADAM17P78536 824 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 MAP2K5Q13163 448 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 ACOX1Q15067 660 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 TTC23LQ6PF05 361 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 GOLGA7Q7Z5G4 137 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 MFSD6LQ8IWD5 586 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 TMEM40Q8WWA1 233 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 NECTIN3Q9NQS3 549 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 POLR3BQ9NW08 1133 aaPredicted RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 CDH7Q9ULB5 785 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 CORO2BQ9UQ03 480 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 KCNH4Q9UQ05 1017 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 PCDHGA11Q9Y5H2 935 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 PCDHA9Q9Y5H5 950 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 A8MX80 341 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 LSM1O15116 133 aaKnown RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 INMTO95050 263 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 RPLP0P05388 317 aaKnown RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 COL6A1P12109 1028 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 DDX5P17844 614 aaKnown RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 CRHBPP24387 322 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 ARNTP27540 789 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 CRATP43155 626 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 TUBA1BP68363 451 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 ZNF404Q494X3 552 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 OTUD1Q5VV17 481 aaPredicted RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 USP43Q70EL4 1123 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 TUBA1AQ71U36 451 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 SLC44A2Q8IWA5 706 aaPredicted RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 SH3YL1Q96HL8 342 aaPredicted RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 HERC2P3Q9BVR0 1158 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 PADI3Q9ULW8 664 aa11.22□□□□□ -0.61
PTCH2-201ENST00000372192 OAS3Q9Y6K5 1087 aaKnown RBP11.22□□□□□ -0.61
PTCH2-201ENST00000372192 FPGTO14772 594 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 CNMDO75829 334 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ALDH2P05091 517 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 PCSK2P16519 638 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 PPIBP23284 216 aaKnown RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 AQP1P29972 269 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 HPCAL1P37235 193 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 SERINC3Q13530 473 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 PTGR1Q14914 329 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 NCF4Q15080 339 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 MARCH8Q5T0T0 291 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 FAM117BQ6P1L5 589 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 GALNT7Q86SF2 657 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 KCNJ9Q92806 393 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 OSBPL10Q9BXB5 764 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ANKHQ9HCJ1 492 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 NLE1Q9NVX2 485 aaPredicted RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 SMPD4Q9NXE4 827 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 PCDHGA8Q9Y5G5 932 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 SH3BGRLO75368 114 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 CCNDBP1O95273 360 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ITGA2P17301 1181 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 COPZ1P61923 177 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ABHD18Q0P651 414 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ELAVL2Q12926 359 aaKnown RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 HIST2H2ACQ16777 129 aaPredicted RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 HIST2H2AA3Q6FI13 130 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 DHRS4L2Q6PKH6 230 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ALKAL1Q6UXT8 129 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 BEND5Q7L4P6 421 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 PIWIL3Q7Z3Z3 882 aaKnown RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ITIH5Q86UX2 942 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ELMO1Q92556 727 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 FUBP1Q96AE4 644 aaKnown RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 ZNF641Q96N77 438 aaPredicted RBP11.21□□□□□ -0.61
PTCH2-201ENST00000372192 CLN6Q9NWW5 311 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 PCTPQ9UKL6 214 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 MAPRE3Q9UPY8 281 aa11.21□□□□□ -0.61
PTCH2-201ENST00000372192 EVPLQ92817 2033 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 HTR3EA5X5Y0 456 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 PRAMEF1O95521 474 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 SPIBQ01892 262 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 PHKG1Q16816 387 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 RAB41Q5JT25 222 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 TMEM236Q5W0B7 351 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 CES5AQ6NT32 575 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 GPR153Q6NV75 609 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 CASP12Q6UXS9 341 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 ZBTB2Q8N680 514 aa11.21□□□□□ -0.62
PTCH2-201ENST00000372192 MTERF3Q96E29 417 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms