RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 GPR34Q9UPC5 381 aa17.12■□□□□ 0.33
SSBP3-203ENST00000371319 ANGPTL3Q9Y5C1 460 aa17.12■□□□□ 0.33
SSBP3-203ENST00000371319 DOCK9Q9BZ29 2069 aa17.12■□□□□ 0.33
SSBP3-203ENST00000371319 C17orf113A0A1B0GUU1 675 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 RNGTTO60942 597 aaKnown RBP17.11■□□□□ 0.33
SSBP3-203ENST00000371319 KATNA1O75449 491 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CHEK2O96017 543 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 GLULP15104 373 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 EPB42P16452 691 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 LBPP18428 481 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 BDKRB1P46663 353 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 HNMTP50135 292 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 HTR6P50406 440 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 ADPRHP54922 357 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
SSBP3-203ENST00000371319 MXRA7P84157 204 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 SLC25A3Q00325 362 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CUL3Q13618 768 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 TMEM259Q4ZIN3 620 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 KIAA1161Q6NSJ0 714 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CRTC3Q6UUV7 619 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 SCIMPQ6UWF3 145 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CFAP206Q8IYR0 622 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 OR2T11Q8NH01 316 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 OR14C36Q8NHC7 312 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CFAP61Q8NHU2 1237 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 KLK6Q92876 244 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 ATP6V1E2Q96A05 226 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 TUBGCP3Q96CW5 907 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 A0A1W2PQU0 124 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CHUKO15111 745 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 HGFP14210 728 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 ITGAXP20702 1163 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 PGM1P36871 562 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CYLC2Q14093 348 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-203ENST00000371319 PLA2G4EQ3MJ16 856 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CCSMST1Q4G0I0 132 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 DOK6Q6PKX4 331 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 CHCHD4Q8N4Q1 142 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 OR2L2Q8NH16 312 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 METTL6Q8TCB7 284 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 HM13Q8TCT9 377 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 MCUR1Q96AQ8 359 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 OSBPL6Q9BZF3 934 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 MMADHCQ9H3L0 296 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-203ENST00000371319 MRGBPQ9NV56 204 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 TRPS1Q9UHF7 1281 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 SCML1Q9UN30 329 aa17.11■□□□□ 0.33
SSBP3-203ENST00000371319 PABPN1LA6NDY0 278 aaKnown RBP17.1■□□□□ 0.33
SSBP3-203ENST00000371319 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 H3BM21 787 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 PSMD12O00232 456 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-203ENST00000371319 CATP04040 527 aaKnown RBP17.1■□□□□ 0.33
SSBP3-203ENST00000371319 EBLN1P0CF75 366 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 GPX3P22352 226 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 TRIM23P36406 574 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 ARL1P40616 181 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-203ENST00000371319 MAPK9P45984 424 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 RIPK1Q13546 671 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 INPP5AQ14642 412 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 PTCHD3Q3KNS1 767 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 OGFOD2Q6N063 350 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 NEK5Q6P3R8 708 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 TMEM92Q6UXU6 159 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 FAM83HQ6ZRV2 1179 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-203ENST00000371319 GK5Q6ZS86 529 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 KLHDC8AQ8IYD2 350 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 RPLP0P6Q8NHW5 317 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 SIPA1Q96FS4 1042 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 MSANTD3Q96H12 275 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 LRCH3Q96II8 777 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 CCT7Q99832 543 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 FZD4Q9ULV1 537 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 RNF11Q9Y3C5 154 aa17.1■□□□□ 0.33
SSBP3-203ENST00000371319 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PRR23AA6NEV1 266 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 WDR47O94967 919 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 ATP6V1G2O95670 118 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PAK4O96013 591 aaPredicted RBP17.09■□□□□ 0.33
SSBP3-203ENST00000371319 MAP4P27816 1152 aaKnown RBP17.09■□□□□ 0.33
SSBP3-203ENST00000371319 RAP1GDS1P52306 607 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PFN3P60673 137 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 CCINQ13939 588 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 FASTKQ14296 549 aaKnown RBP17.09■□□□□ 0.33
SSBP3-203ENST00000371319 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 RNF165Q6ZSG1 346 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 Q6ZSR9 355 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 HORMAD1Q86X24 394 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 SNX31Q8N9S9 440 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 FAM3CQ92520 227 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 CCDC138Q96M89 665 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PKP4Q99569 1192 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PREBQ9HCU5 417 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PFDN4Q9NQP4 134 aa17.09■□□□□ 0.33
SSBP3-203ENST00000371319 PRKAB1Q9Y478 270 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms