RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ELK4P28324 431 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 SPAM1P38567 509 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 ARSFP54793 590 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 ZBED5Q49AG3 693 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 DET1Q7L5Y6 550 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 HS3ST5Q8IZT8 346 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 ISOC1Q96CN7 298 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 AURKBQ96GD4 344 aaPredicted RBP17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 POLR1BQ9H9Y6 1135 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 IL21Q9HBE4 155 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 TMEM45AQ9NWC5 275 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 ZNF639Q9UID6 485 aa17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 INTS6Q9UL03 887 aaKnown RBP17.72■□□□□ 0.43
UBQLN4-201ENST00000368309 hCG_2014768A0A024R1R8 64 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 TRBV5-4A0A0C4DH59 114 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GFRA2O00451 464 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 MANBAO00462 879 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 CLGNO14967 610 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 DEAF1O75398 565 aaPredicted RBP17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 C7P10643 843 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GABRR2P28476 465 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 ADARB1P78563 741 aaKnown RBP17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 CYP4F3Q08477 520 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 CRTC1Q6UUV9 634 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GCNT7Q6ZNI0 430 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 MSRB3Q8IXL7 192 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 SLC22A15Q8IZD6 547 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 SMG9Q9H0W8 520 aaKnown RBP17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 CXorf21Q9HAI6 301 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 ARL15Q9NXU5 204 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 TUBA8Q9NY65 449 aaPredicted RBP17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 B3GALT4O96024 378 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GSNP06396 782 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 RPIAP49247 311 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 HSPA14Q0VDF9 509 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 NEDD8Q15843 81 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 CACHD1Q5VU97 1274 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 MACC1Q6ZN28 852 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 PYCR2Q96C36 320 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 OR52E6Q96RD3 313 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 HTATIP2Q9BUP3 242 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 ACTR8Q9H981 624 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GRXCR2A6NFK2 248 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 SLC28A1O00337 649 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 PPP3CCP48454 512 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 CRY1Q16526 586 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 ATP13A5Q4VNC0 1218 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GPR107Q5VW38 600 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 OR8J3Q8NGG0 315 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 OR10Q1Q8NGQ4 319 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 GAB3Q8WWW8 586 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 C12orf43Q96C57 262 aaKnown RBP17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 SMURF2Q9HAU4 748 aa17.71■□□□□ 0.43
UBQLN4-201ENST00000368309 NRG2O14511 850 aaPredicted RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 FOXD2O60548 495 aaPredicted RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 EEF1B2P24534 225 aaKnown RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 STT3AP46977 705 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 KCTD8Q6ZWB6 473 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 GAREM2Q75VX8 874 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 ANKRD46Q86W74 232 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 ALDH16A1Q8IZ83 802 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 ACDQ96AP0 544 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 DTNBP1Q96EV8 351 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 C8orf4Q9NR00 106 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 PKD2L2Q9NZM6 624 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 PLXNA4Q9HCM2 1894 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 TRIM64CA6NLI5 447 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 IFRD1O00458 451 aaPredicted RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 BCKDHAP12694 445 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 CCR7P32248 378 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 GRAMD4Q6IC98 578 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 PRR23BQ6ZRT6 265 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 HS6ST3Q8IZP7 471 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 TIMMDC1Q9NPL8 285 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 MRPL17Q9NRX2 175 aaKnown RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 INVSQ9Y283 1065 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 ANAPC1Q9H1A4 1944 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 AREL1O15033 823 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 NOBOXO60393 691 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 TULP3O75386 442 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 IGSF6O95976 241 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 EBLN1P0CF75 366 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 MSH3P20585 1137 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 SERPINA4P29622 427 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 PHC1P78364 1004 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 RAB33AQ14088 237 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 ZXDCQ2QGD7 858 aaPredicted RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 PLEKHG6Q3KR16 790 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 USP51Q70EK9 711 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 TRIM46Q7Z4K8 759 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 C10orf111Q8N326 155 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 ZNF548Q8NEK5 533 aaPredicted RBP17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 B4GALNT2Q8NHY0 566 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 SLC22A17Q8WUG5 538 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 CAPNS2Q96L46 248 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 NTMT1Q9BV86 223 aa17.7■□□□□ 0.42
UBQLN4-201ENST00000368309 DLGAP4Q9Y2H0 992 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms