RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 NSUN3Q9H649 340 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 A0A1W2PQ67 120 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 ZBTB42B2RXF5 422 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 HAS3O00219 553 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 STX16O14662 325 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 RSL1D1O76021 490 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 EPOP01588 193 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 CTNNB1P35222 781 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ACADVLP49748 655 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 SEPHS1P49903 392 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 GPR33Q49SQ1 333 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 PIK3R6Q5UE93 754 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 BHLHB9Q6PI77 547 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 C16orf62Q7Z3J2 963 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 IGSF8Q969P0 613 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ABCB8Q9NUT2 735 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 RUVBL1Q9Y265 456 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 TCRBV5S1A1TA0A578 114 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 MTMR11A4FU01 709 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ADAMDEC1O15204 470 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 HPGDP15428 266 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ARSDP51689 593 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 TUBA4AP68366 448 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ZNF280BQ86YH2 543 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 DNAJB8Q8NHS0 232 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 CD99L2Q8TCZ2 262 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 SLC38A2Q96QD8 506 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 TEFMQ96QE5 360 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 WRAP53Q9BUR4 548 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 POPDC3Q9HBV1 291 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 KIAA1551Q9HCM1 1747 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 PER2O15055 1255 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 KDELR3O43731 214 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 PTSQ03393 145 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 ATG14Q6ZNE5 492 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 CFAP206Q8IYR0 622 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 YTHDF1Q9BYJ9 559 aaKnown RBP11.47□□□□□ -0.57
COPA-202ENST00000368069 SSR3Q9UNL2 185 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 GTF2A1LQ9UNN4 478 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 YIPF1Q9Y548 306 aa11.47□□□□□ -0.57
COPA-202ENST00000368069 PSMD11O00231 422 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 AGRPO00253 132 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 AIREO43918 545 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 TMCC2O75069 709 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 ACADMP11310 421 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 SSR2P43308 183 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 TRIM32Q13049 653 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.57
COPA-202ENST00000368069 SPANXN4Q5MJ08 99 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 RBM48Q5RL73 367 aaKnown RBP11.46□□□□□ -0.57
COPA-202ENST00000368069 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 MCMBPQ9BTE3 642 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 DUSP26Q9BV47 211 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 MYO18AQ92614 2054 aaKnown RBP11.46□□□□□ -0.57
COPA-202ENST00000368069 A6NHS1 94 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 LOC730098B7Z3J9 87 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 GRID2O43424 1007 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 OR1I1O60431 355 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 BMP10O95393 424 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 CLDN7O95471 211 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 IFNW1P05000 195 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 PABPC4LP0CB38 370 aaKnown RBP11.46□□□□□ -0.57
COPA-202ENST00000368069 POU2F1P14859 743 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 GPR17Q13304 367 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 GNA13Q14344 377 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 VN1R5Q7Z5H4 357 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 KBTBD6Q86V97 674 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 CACTIN-AS1Q8N1I8 211 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 FAR1Q8WVX9 515 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.57
COPA-202ENST00000368069 CHCHD6Q9BRQ6 235 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 NDEL1Q9GZM8 345 aa11.46□□□□□ -0.57
COPA-202ENST00000368069 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 UGT2B17O75795 530 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 MAGEA11P43364 429 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 EMX2Q04743 252 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 SFSWAPQ12872 951 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 DPY19L1Q2PZI1 675 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 C6orf136Q5SQH8 315 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 PLPP4Q5VZY2 271 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 OR4F3Q6IEY1 312 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 KLHL17Q6TDP4 642 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 DNAJB7Q7Z6W7 309 aaPredicted RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 PHYKPLQ8IUZ5 450 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 KDM1BQ8NB78 822 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 ST13P5Q8NFI4 369 aaPredicted RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 GTPBP3Q969Y2 492 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 ACDQ96AP0 544 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 MRPL48Q96GC5 212 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 SCLYQ96I15 445 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 DEPDC7Q96QD5 511 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 FERD3LQ96RJ6 166 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms