RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MAN2B2Q9Y2E5 1009 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 FCF1Q9Y324 198 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 TRBV5-3A0A0A0MS03 114 aa14□□□□□ -0.17
CD48-201ENST00000368045 EIF3FO00303 357 aaPredicted RBP14□□□□□ -0.17
CD48-201ENST00000368045 GPR39O43194 453 aa14□□□□□ -0.17
CD48-201ENST00000368045 DNAJB5O75953 348 aa14□□□□□ -0.17
CD48-201ENST00000368045 GUCA1CO95843 209 aa14□□□□□ -0.17
CD48-201ENST00000368045 CST1P01037 141 aa14□□□□□ -0.17
CD48-201ENST00000368045 TRBC1P01850 177 aa14□□□□□ -0.17
CD48-201ENST00000368045 KRT6AP02538 564 aa14□□□□□ -0.17
CD48-201ENST00000368045 KRT6BP04259 564 aa14□□□□□ -0.17
CD48-201ENST00000368045 ALPIP09923 528 aa14□□□□□ -0.17
CD48-201ENST00000368045 EPB42P16452 691 aa14□□□□□ -0.17
CD48-201ENST00000368045 GSTM2P28161 218 aa14□□□□□ -0.17
CD48-201ENST00000368045 STT3AP46977 705 aa14□□□□□ -0.17
CD48-201ENST00000368045 KRT6CP48668 564 aa14□□□□□ -0.17
CD48-201ENST00000368045 ENTPD1P49961 510 aa14□□□□□ -0.17
CD48-201ENST00000368045 BCL2L1Q07817 233 aa14□□□□□ -0.17
CD48-201ENST00000368045 VEPH1Q14D04 833 aa14□□□□□ -0.17
CD48-201ENST00000368045 TAF12Q16514 161 aa14□□□□□ -0.17
CD48-201ENST00000368045 RFX4Q33E94 735 aa14□□□□□ -0.17
CD48-201ENST00000368045 RETSATQ6NUM9 610 aa14□□□□□ -0.17
CD48-201ENST00000368045 ITIH5Q86UX2 942 aa14□□□□□ -0.17
CD48-201ENST00000368045 ADHFE1Q8IWW8 467 aa14□□□□□ -0.17
CD48-201ENST00000368045 MSRB3Q8IXL7 192 aa14□□□□□ -0.17
CD48-201ENST00000368045 OR10A6Q8NH74 314 aa14□□□□□ -0.17
CD48-201ENST00000368045 OR5K1Q8NHB7 308 aa14□□□□□ -0.17
CD48-201ENST00000368045 MIPOL1Q8TD10 442 aa14□□□□□ -0.17
CD48-201ENST00000368045 LKAAEAR1Q8TD35 194 aa14□□□□□ -0.17
CD48-201ENST00000368045 WBP2Q969T9 261 aa14□□□□□ -0.17
CD48-201ENST00000368045 ULK4Q96C45 1275 aa14□□□□□ -0.17
CD48-201ENST00000368045 HBEGFQ99075 208 aa14□□□□□ -0.17
CD48-201ENST00000368045 DCUN1D5Q9BTE7 237 aa14□□□□□ -0.17
CD48-201ENST00000368045 FAM118AQ9NWS6 357 aa14□□□□□ -0.17
CD48-201ENST00000368045 KCTD5Q9NXV2 234 aa14□□□□□ -0.17
CD48-201ENST00000368045 KLQ9UEF7 1012 aa14□□□□□ -0.17
CD48-201ENST00000368045 CRLS1Q9UJA2 301 aa14□□□□□ -0.17
CD48-201ENST00000368045 ZNF490Q9ULM2 529 aaPredicted RBP14□□□□□ -0.17
CD48-201ENST00000368045 A0A096LPI6 279 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 GLYATL1P3A0A0U1RQE8 302 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 C1orf232A0A0U1RR37 186 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 SEC22BO75396 215 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 STK16O75716 305 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ABLIM3O94929 683 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TRIM16O95361 564 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 SEC24AO95486 1093 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PRPS2P11908 318 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TCF3P15923 654 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CCNA2P20248 432 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CRHBPP24387 322 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 EEF1B2P24534 225 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 SPAM1P38567 509 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CSKP41240 450 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PPP2R2BQ00005 443 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PTGR1Q14914 329 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 GPNMBQ14956 572 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 NEDD8Q15843 81 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CDKN3Q16667 212 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PHKG1Q16816 387 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ZNF829Q3KNS6 432 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 PLA2G4EQ3MJ16 856 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ZIK1Q3SY52 487 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 SPANXN4Q5MJ08 99 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 LRIF1Q5T3J3 769 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ENPP6Q6UWR7 440 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CALHM3Q86XJ0 350 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PLPP6Q8IY26 295 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 RGL4Q8IZJ4 473 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 FBXO30Q8TB52 745 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TBC1D15Q8TC07 691 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 RAB2BQ8WUD1 216 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 FAM162AQ96A26 154 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 MBOAT4Q96T53 435 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 BOCQ9BWV1 1114 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 APOL5Q9BWW9 433 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CARS2Q9HA77 564 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 FANCEQ9HB96 536 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TBC1D23Q9NUY8 699 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 DCAF13Q9NV06 445 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 RNF186Q9NXI6 227 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 INVSQ9Y283 1065 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 YIPF1Q9Y548 306 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 HEMK1Q9Y5R4 338 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 PRSS21Q9Y6M0 314 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ZFC3H1O60293 1989 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 A0A0U1RQS6 177 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 C2orf78A6NCI8 922 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 RECQL5O94762 991 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 ANXA5P08758 320 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ACPPP15309 386 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ITGB6P18564 788 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ELK4P28324 431 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 NFATC3Q12968 1075 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PLD1Q13393 1074 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TMED1Q13445 227 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 IL18R1Q13478 541 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CDH18Q13634 790 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 C16orf72Q14CZ0 275 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 MOGQ16653 247 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms