RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PDCD2LQ9BRP1 358 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 NDC1Q9BTX1 674 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 NOX1Q9Y5S8 564 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ABCC3O15438 1527 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 A0A1W2PRQ8 180 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 FAM234BA2RU67 622 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ZNF878C9JN71 531 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 TP73O15350 636 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 IFNA1P01562 189 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ITGB1P05556 798 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 COL6A1P12109 1028 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 CD36P16671 472 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SLC7A1P30825 629 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 RAB5BP61020 215 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 TARDBPQ13148 414 aaKnown RBP eCLIP12.24□□□□□ -0.45
TPR-201ENST00000367478 ZBTB46Q86UZ6 589 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 OR52J3Q8NH60 311 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 IRF2BPLQ9H1B7 796 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 GBA3Q9H227 469 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 POFUT2Q9Y2G5 429 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 CYP11A1P05108 521 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 XKP51811 444 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 LIMK2P53671 638 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 WNT3AP56704 352 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 MPP1Q00013 466 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SEMA5AQ13591 1074 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SPIN3Q5JUX0 258 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 IL23RQ5VWK5 629 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SMARCD3Q6STE5 483 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 RALGPS2Q86X27 583 aaPredicted RBP12.24□□□□□ -0.45
TPR-201ENST00000367478 ATAD1Q8NBU5 361 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 LRRC3Q9BY71 257 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 FETUBQ9UGM5 382 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
TPR-201ENST00000367478 HK1P19367 917 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 CDH12P55289 794 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SEC23BQ15437 767 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SLC1A5Q15758 541 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 TEX44Q53QW1 395 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 NPNTQ6UXI9 565 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ZSCAN4Q8NAM6 433 aaPredicted RBP12.24□□□□□ -0.45
TPR-201ENST00000367478 EPYCQ99645 322 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 FUCA2Q9BTY2 467 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 OR51V1Q9H2C8 321 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 CD93Q9NPY3 652 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 PNPOQ9NVS9 261 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ARPC4-TTLL3A0A0A6YYG9 625 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 TTLL8A6PVC2 850 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 AGRPO00253 132 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 SLIT1O75093 1534 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 ALPPP05187 535 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 CRISP3P54108 245 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 LDLRAP1Q5SW96 308 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 WSCD1Q658N2 575 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 C7orf61Q8IZ16 206 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 LPGAT1Q92604 370 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 GTPBP3Q969Y2 492 aaKnown RBP12.24□□□□□ -0.45
TPR-201ENST00000367478 TMEM9Q9P0T7 183 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 GTF2IRD1Q9UHL9 959 aa12.24□□□□□ -0.45
TPR-201ENST00000367478 MERTKQ12866 999 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
TPR-201ENST00000367478 MIR1-1HGQ9H1L0 117 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 HHATLQ9HCP6 504 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 NCOA3Q9Y6Q9 1424 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 NDST3O95803 873 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 MRPS5P82675 430 aaKnown RBP12.23□□□□□ -0.45
TPR-201ENST00000367478 C3orf33Q6P1S2 294 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 MOB2Q70IA6 237 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 CPA6Q8N4T0 437 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 DMRTB1Q96MA1 342 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 POLR2J3Q9H1A7 115 aaKnown RBP12.23□□□□□ -0.45
TPR-201ENST00000367478 OR10A4Q9H209 315 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 AGO3Q9H9G7 860 aaKnown RBP12.23□□□□□ -0.45
TPR-201ENST00000367478 ERVW-1Q9UQF0 538 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 PADI2Q9Y2J8 665 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 ARL5AQ9Y689 179 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 A0A0J9YVX5 310 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 CXCR6O00574 342 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 B3GALT2O43825 422 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 C2P06681 752 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 LY6KQ17RY6 165 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
TPR-201ENST00000367478 GALNT13Q8IUC8 556 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 FAM105AQ9NUU6 356 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 UBQLN2Q9UHD9 624 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
TPR-201ENST00000367478 H0YGN5 161 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 HERV-K104P61576 105 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 PHC2Q8IXK0 858 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 OR5B12Q96R08 314 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 NMUR2Q9GZQ4 415 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 CASRP41180 1078 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 GNMTQ14749 295 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 ZBED5Q49AG3 693 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 OGFOD2Q6N063 350 aa12.23□□□□□ -0.45
TPR-201ENST00000367478 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms