RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RAB26Q9ULW5 256 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CRYL1Q9Y2S2 319 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 FIS1Q9Y3D6 152 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ARL5AQ9Y689 179 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CD3EAPO15446 510 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 RTN3O95197 1032 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 FGF1P05230 155 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 C8BP07358 591 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ZDHHC11BP0C7U3 371 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 MTHFD2P13995 350 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 OR1E1P30953 314 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ACADVLP49748 655 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CHN2P52757 468 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CAP1Q01518 475 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PRKCZQ05513 592 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 LAMB3Q13751 1172 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 FASTKQ14296 549 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PTPRCAPQ14761 206 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CTXN3Q4LDR2 81 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 LIN52Q52LA3 116 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 RARS2Q5T160 578 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PAOXQ6QHF9 649 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 HACD2Q6Y1H2 254 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CIR1Q86X95 450 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 MIB1Q86YT6 1006 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 GALNT15Q8N3T1 639 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CATSPER1Q8NEC5 780 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 RHEBL1Q8TAI7 183 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 BRSK1Q8TDC3 778 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 FBXO32Q969P5 355 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 DUS3LQ96G46 650 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 DNAJC1Q96KC8 554 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SPATA17Q96L03 361 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 RPRD1AQ96P16 312 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 TRIB3Q96RU7 358 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 COPS7BQ9H9Q2 264 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 TLR8Q9NR97 1041 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PAPOLBQ9NRJ5 636 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 UBAP1Q9NZ09 502 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CNOT11Q9UKZ1 510 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PRG3Q9Y2Y8 225 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 GREB1Q4ZG55 1949 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CCDC162PA2VCL2 907 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 OR6C75A6NL08 312 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 RPP40O75818 363 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SOAT2O75908 522 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 GLP2RO95838 553 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 F13BP05160 661 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PABPC4LP0CB38 370 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 HOXB8P17481 243 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 HDCP19113 662 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 TRAP1Q12931 704 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 TYSND1Q2T9J0 566 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 C10orf120Q5SQS8 335 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 THEMIS2Q5TEJ8 643 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 NAIF1Q69YI7 327 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CLEC6AQ6EIG7 209 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 FUNDC1Q8IVP5 155 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ST13P4Q8IZP2 240 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CLYBLQ8N0X4 340 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PCDH20Q8N6Y1 951 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ZFAND2BQ8WV99 257 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 NCSTNQ92542 709 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 FOXRED1Q96CU9 486 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 C3orf30Q96M34 536 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF599Q96NL3 588 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 MRPL40Q9NQ50 206 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 COMMD8Q9NX08 183 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CCDC167Q9P0B6 97 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 TMEM181Q9P2C4 612 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CHD5Q8TDI0 1954 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 THSD7BQ9C0I4 1608 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PRORSD1PA6NEY8 169 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 TBC1D4O60343 1298 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 RNASEH2AO75792 299 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SUPT7LO94864 414 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ALDOCP09972 364 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF37AP17032 561 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 OGNP20774 298 aaKnown RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PSMA3P25788 255 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 STT3AP46977 705 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 CLCN2P51788 898 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SREBF2Q12772 1141 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 OR4D1Q15615 310 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 AGKQ53H12 422 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SLC30A9Q6PML9 568 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ISLR2Q6UXK2 745 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 OR52K2Q8NGK3 314 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 C19orf60Q96EN9 201 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 NSMCE3Q96MG7 304 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 FAM193BQ96PV7 902 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ASB2Q96Q27 587 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 ATOH8Q96SQ7 321 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 MGME1Q9BQP7 344 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SLC25A23Q9BV35 468 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 SPATA16Q9BXB7 569 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 GPR62Q9BZJ7 368 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms