RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 IKBKGQ9Y6K9 419 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 CACNA1CQ13936 2221 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 A0A0J9YY10 115 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 H3BRJ5 948 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 H7C0S8 307 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 CLDN7O95471 211 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 GZMAP12544 262 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 ACADLP28330 430 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 OPRM1P35372 400 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 NIPAL4Q0D2K0 466 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 TMEM115Q12893 351 aaPredicted RBP5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 PNOCQ13519 176 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 IFI16Q16666 785 aaKnown RBP5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 IRGCQ6NXR0 463 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 ACAD11Q709F0 780 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 TRIM48Q8IWZ4 208 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 MCOLN2Q8IZK6 566 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 GHDCQ8N2G8 530 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 EMC1Q8N766 993 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 SECISBP2Q96T21 854 aaKnown RBP5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 TUBGCP2Q9BSJ2 902 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 GSX1Q9H4S2 264 aaPredicted RBP5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 CBX8Q9HC52 389 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 HRASLS2Q9NWW9 162 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 STMN3Q9NZ72 180 aa5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 GPN3Q9UHW5 284 aaPredicted RBP5.73□□□□□ -1.49
CDC42SE2-201ENST00000360515 OR14I1A6ND48 311 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TMEM150CB9EJG8 249 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 BTN3A1O00481 513 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ZSCAN9O15535 394 aaPredicted RBP5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 IGHG3P01860 377 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TPBGLP0DKB5 382 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ERGP11308 486 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TYRP1P17643 537 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 DNASE1P24855 282 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 SOX5P35711 763 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 SLC26A3P40879 764 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 MAMLD1Q13495 774 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 RASGEF1AQ8N9B8 481 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 FICDQ9BVA6 458 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 OR2AG1Q9H205 316 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PDCL3Q9H2J4 239 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PLEKHF2Q9H8W4 249 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 POLG2Q9UHN1 485 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PTRH2Q9Y3E5 179 aaKnown RBP5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ZNF711Q9Y462 761 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PCNX1Q96RV3 2341 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 NME2P1O60361 137 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 SRPX2O60687 465 aaPredicted RBP5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 AP2A2O94973 939 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 MYBL1P10243 752 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ST6GAL1P15907 406 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 NME2P22392 152 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 SLC25A11Q02978 314 aaKnown RBP5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 KRTAP1-1Q07627 177 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ZIC1Q15915 447 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TAZQ16635 292 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 CA9Q16790 459 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PRTGQ2VWP7 1150 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 RIPPLY2Q5TAB7 128 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PLAG1Q6DJT9 500 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 OLFM3Q96PB7 478 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 MLPHQ9BV36 600 aaPredicted RBP5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 RAB11FIP5Q9BXF6 653 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 NENFQ9UMX5 172 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 NCKAP5O14513 1909 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 CCDC78A2IDD5 438 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 GSAPA4D1B5 854 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 AGRPO00253 132 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 BTN3A3O00478 584 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 UGT1A9O60656 530 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 RASSF9O75901 435 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TSPAN12O95859 305 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 SHMT2P34897 504 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PPP2R2AP63151 447 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PLOD1Q02809 727 aaPredicted RBP5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 GARNL3Q5VVW2 1013 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 NAA35Q5VZE5 725 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 PACS1Q6VY07 963 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 LEKR1Q6ZMV7 388 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TRIM74Q86UV6 250 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 CLIP3Q96DZ5 547 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ZNF670Q9BS34 389 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 TUBB6Q9BUF5 446 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 ZFYVE1Q9HBF4 777 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 MMP25Q9NPA2 562 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 RIC8BQ9NVN3 520 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 IL17CQ9P0M4 197 aa5.72□□□□□ -1.49
CDC42SE2-201ENST00000360515 SYNDIG1LA6NDD5 238 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 KIAA1324LA8MWY0 1029 aaPredicted RBP5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 PRPF4O43172 522 aaKnown RBP eCLIP5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 CRLF1O75462 422 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 INHBBP09529 407 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 ATP11AP98196 1134 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 ZC3H12BQ5HYM0 836 aaKnown RBP5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 DOK6Q6PKX4 331 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 RGS9BPQ6ZS82 235 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 ULK4Q96C45 1275 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 SELENOOQ9BVL4 669 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 SEPT11Q9NVA2 429 aaKnown RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms