RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 REXO2Q9Y3B8 237 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TNFRSF18Q9Y5U5 241 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 POLR2AP24928 1970 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 A0A0G2JPF8 293 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 HNRNPCL3B7ZW38 293 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 H7C4K7 107 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TLR4O00206 839 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ATP2A1O14983 1001 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRKAB2O43741 272 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 HBP1O60381 514 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 SOX30O94993 753 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CSF2P04141 144 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 HNRNPCL4P0DMR1 293 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 MYBL1P10243 752 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 HOXC9P31274 260 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 DCTDP32321 178 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CEACAM6P40199 344 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CRYBB1P53674 252 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMPRSS3P57727 454 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 STX1BP61266 288 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 BMPR2Q13873 1038 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 LARS2Q15031 903 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CEBPEQ15744 281 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CHRNA6Q15825 494 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC5A12Q1EHB4 618 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TWISTNBQ3B726 338 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRAMEF8Q5VWM4 474 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 GPR139Q6DWJ6 353 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 KLHL17Q6TDP4 642 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 GPR141Q7Z602 305 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ADCK1Q86TW2 530 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMPRSS12Q86WS5 348 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TIGD4Q8IY51 512 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 RBMXL3Q8N7X1 1067 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ENDOVQ8N8Q3 282 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CAGE1Q8TC20 777 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NRGNQ92686 78 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 KAT2AQ92830 837 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 LCORQ96JN0 433 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CDK5RAP1Q96SZ6 601 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRPF18Q99633 342 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TRIM45Q9H8W5 580 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NTN4Q9HB63 628 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 MSL2Q9HCI7 577 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 JPH1Q9HDC5 661 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 C20orf141Q9NUB4 165 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PADI3Q9ULW8 664 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 SIT1Q9Y3P8 196 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TRIOO75962 3097 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 DMXL1Q9Y485 3027 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ATP8B3O60423 1300 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 UBN2Q6ZU65 1347 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRKDCP78527 4128 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZBTB43O43298 467 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 MED24O75448 989 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 SERPINB7O75635 380 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 UNC5CO95185 931 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 IFNB1P01574 187 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NFICP08651 508 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 WEE2P0C1S8 567 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CTSAP10619 480 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CPA1P15085 419 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 HLA-DPA1P20036 260 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 MARCKSP29966 332 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 BTDP43251 543 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCNJ1P48048 391 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NRG3P56975 720 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PPARAQ07869 468 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 GPS1Q13098 491 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 EIF4EBP2Q13542 120 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 CUL2Q13617 745 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 E2F2Q14209 437 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ACAP2Q15057 778 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ATXN7L2Q5T6C5 722 aaPredicted RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 WBP2NLQ6ICG8 309 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMEM81Q6P7N7 255 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NOXA1Q86UR1 476 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 DTX2Q86UW9 622 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PTOV1Q86YD1 416 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 FAM219AQ8IW50 185 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 MB21D1Q8N884 522 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRR26Q8N8Z3 221 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ENGASEQ8NFI3 743 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 OR13C2Q8NGS9 318 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 SETD7Q8WTS6 366 aaKnown RBP1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC25A36Q96CQ1 311 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 TM4SF19Q96DZ7 209 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 LOXL4Q96JB6 756 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 MIPEPQ99797 713 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCNK12Q9HB15 430 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 INTS13Q9NVM9 706 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NDUFA13Q9P0J0 144 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 LRWD1Q9UFC0 647 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 RCOR1Q9UKL0 485 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 BAG5Q9UL15 447 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ADAMTS5Q9UNA0 930 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCDHB4Q9Y5E5 795 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 HS3ST3B1Q9Y662 390 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 ABCC4O15439 1325 aa1.8□□□□□ -2.12
SMARCAD1-202ENST00000359052 NRCAMQ92823 1304 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms