RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 TRIT1Q9H3H1 467 aaKnown RBP16.55■□□□□ 0.24
FAM3D-201ENST00000358781 APMAPQ9HDC9 416 aa16.55■□□□□ 0.24
FAM3D-201ENST00000358781 C20orf96Q9NUD7 363 aaPredicted RBP16.55■□□□□ 0.24
FAM3D-201ENST00000358781 INTS10Q9NVR2 710 aaKnown RBP16.55■□□□□ 0.24
FAM3D-201ENST00000358781 POLG2Q9UHN1 485 aa16.55■□□□□ 0.24
FAM3D-201ENST00000358781 VPS9D1Q9Y2B5 631 aa16.55■□□□□ 0.24
FAM3D-201ENST00000358781 FAM169AQ9Y6X4 670 aa16.55■□□□□ 0.24
FAM3D-201ENST00000358781 H3BMM5 538 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 STMND1H3BQB6 276 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 SMAPO00193 183 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 MATN2O00339 956 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 KPNA5O15131 536 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 POLR1CO15160 346 aaPredicted RBP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 BANF1O75531 89 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 S1PR4O95977 384 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 NELFEP18615 380 aaKnown RBP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 KPNA2P52292 529 aaKnown RBP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 SH3BP2P78314 561 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 DHX9Q08211 1270 aaKnown RBP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 PRKAA1Q13131 559 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 HIBCHQ6NVY1 386 aaPredicted RBP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 AMIGO1Q86WK6 493 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 LMNTD2Q8IXW0 634 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 SPATA4Q8NEY3 305 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 SNF8Q96H20 258 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 EBNA1BP2Q99848 306 aaKnown RBP16.54■□□□□ 0.24
FAM3D-201ENST00000358781 PRORYQ9H606 182 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 POMT2Q9UKY4 750 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 CRYL1Q9Y2S2 319 aa16.54■□□□□ 0.24
FAM3D-201ENST00000358781 BTN3A3O00478 584 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 BTN3A1O00481 513 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
FAM3D-201ENST00000358781 TTC4O95801 387 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 ITGA8P53708 1063 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 TMPRSS3P57727 454 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 FOXM1Q08050 763 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 CRYMQ14894 314 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 BBS9Q3SYG4 887 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 ZNF789Q5FWF6 425 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 PLEKHS1Q5SXH7 462 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 OTOAQ7RTW8 1153 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 KMT5CQ86Y97 462 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 IGDCC3Q8IVU1 814 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 DENND6AQ8IWF6 608 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 PDIK1LQ8N165 341 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 CARFQ8N187 725 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 CALML6Q8TD86 181 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 OR6C1Q96RD1 312 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 NAT9Q9BTE0 207 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 TRIM31Q9BZY9 425 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 XKR8Q9H6D3 395 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 ICKQ9UPZ9 632 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 TDRKHQ9Y2W6 561 aaKnown RBP16.53■□□□□ 0.24
FAM3D-201ENST00000358781 PCDHB11Q9Y5F2 797 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 IGSF10Q6WRI0 2623 aa16.53■□□□□ 0.24
FAM3D-201ENST00000358781 GSAPA4D1B5 854 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 TP73O15350 636 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 NIPSNAP2O75323 286 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 TPBGLP0DKB5 382 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 PKMP14618 531 aaKnown RBP16.52■□□□□ 0.24
FAM3D-201ENST00000358781 SHMT2P34897 504 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 SLC1A2P43004 574 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 ABRQ12979 859 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 CTBP1Q13363 440 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 IL11RAQ14626 422 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 UNC5DQ6UXZ4 953 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 ADGRF3Q8IZF5 1079 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 UNC5BQ8IZJ1 945 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 SIDT2Q8NBJ9 832 aaKnown RBP16.52■□□□□ 0.24
FAM3D-201ENST00000358781 GSDMBQ8TAX9 411 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 PPM1MQ96MI6 270 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 PWWP2AQ96N64 755 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 CCNL2Q96S94 520 aaPredicted RBP16.52■□□□□ 0.24
FAM3D-201ENST00000358781 FAM167BQ9BTA0 163 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 SPRY4Q9C004 299 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 CPNE5Q9HCH3 593 aa16.52■□□□□ 0.24
FAM3D-201ENST00000358781 FBXO6Q9NRD1 293 aaPredicted RBP16.52■□□□□ 0.24
FAM3D-201ENST00000358781 FAM187AA6NFU0 413 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 C2orf74A8MZ97 194 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 KDM1AO60341 852 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 ZBTB11O95625 1053 aaPredicted RBP16.51■□□□□ 0.23
FAM3D-201ENST00000358781 RPN2P04844 631 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 F7P08709 466 aaPredicted RBP16.51■□□□□ 0.23
FAM3D-201ENST00000358781 FOLR1P15328 257 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 PRDX3P30048 256 aaKnown RBP16.51■□□□□ 0.23
FAM3D-201ENST00000358781 RPL21P46778 160 aaKnown RBP16.51■□□□□ 0.23
FAM3D-201ENST00000358781 ARL4DP49703 201 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 CXADRP78310 365 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 HSD11B2P80365 405 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 MRPS25P82663 173 aaKnown RBP16.51■□□□□ 0.23
FAM3D-201ENST00000358781 C2orf54Q08AI8 447 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 GBX1Q14549 363 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 KCNAB1Q14722 419 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 HIF1AQ16665 826 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 HSP90AA5PQ58FG0 334 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 SPANXN3Q5MJ09 141 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 UNC5AQ6ZN44 842 aa16.51■□□□□ 0.23
FAM3D-201ENST00000358781 KCNMB4Q86W47 210 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms