RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 STAMBPL1Q96FJ0 436 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 TRAPPC9Q96Q05 1148 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 ALS2CR12Q96Q35 445 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 PITPNM3Q9BZ71 974 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 TRIM4Q9C037 500 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 TFB2MQ9H5Q4 396 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 FAM60AQ9NP50 221 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 EIF2B3Q9NR50 452 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 HELZ2Q9BYK8 2649 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 GOLGA8TH3BQL2 631 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 IFRD1O00458 451 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 AVILO75366 819 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 TMEM63AO94886 807 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 ZBTB11O95625 1053 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 NR1D1P20393 614 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 CDH3P22223 829 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 GABRA4P48169 554 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 VPS41P49754 854 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 DNASE1L3Q13609 305 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 ERV3-1Q14264 604 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 KCNJ11Q14654 390 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 PCID2Q5JVF3 399 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 BORAQ6PGQ7 559 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 UNC5AQ6ZN44 842 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 AMIGO1Q86WK6 493 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 KMT5CQ86Y97 462 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 AGGF1Q8N302 714 aaeCLIP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 KIAA1143Q96AT1 154 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 MFSD3Q96ES6 412 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 TRIT1Q9H3H1 467 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 MVB12BQ9H7P6 319 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 PDE7BQ9NP56 450 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 GEMIN8Q9NWZ8 242 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 SOHLH2Q9NX45 425 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 ACTR10Q9NZ32 417 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 IL1RAPL1Q9NZN1 696 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 HEBP2Q9Y5Z4 205 aa16.21■□□□□ 0.19
PDLIM7-201ENST00000355572 KATNA1O75449 491 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 UGT2B7P16662 529 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 TCN2P20062 427 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 TUBB4BP68371 445 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 ACY1Q03154 408 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 TUBB2AQ13885 445 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 DEFB110Q30KQ9 67 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 CTSL3PQ5NE16 218 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 CDHR3Q6ZTQ4 885 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 PTRH1Q86Y79 214 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 RASGEF1CQ8N431 466 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 COG1Q8WTW3 980 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 SGSM3Q96HU1 749 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 IL17FQ96PD4 163 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 OR2A14Q96R47 310 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 TUBB2BQ9BVA1 445 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 P2RY12Q9H244 342 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 C1GALT1Q9NS00 363 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 RUVBL2Q9Y230 463 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 ASF1AQ9Y294 204 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 TDRKHQ9Y2W6 561 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 NEU2Q9Y3R4 380 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 SEC16AO15027 2179 aa16.2■□□□□ 0.18
PDLIM7-201ENST00000355572 PCM1Q15154 2024 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 TLN1Q9Y490 2541 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 H3BMH7 237 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 SLC28A2O43868 658 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 GPC4O75487 556 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 SCRG1O75711 98 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 FTH1P02794 183 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 CAPN1P07384 714 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 OR56A5P0C7T3 313 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 PRAMEP78395 509 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 KCNAB2Q13303 367 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 IL10RAQ13651 578 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 FASTKD1Q53R41 847 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 ARMC6Q6NXE6 501 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 ZNF517Q6ZMY9 492 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 LINC01555Q8NAE3 123 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 VPS37BQ9H9H4 285 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 KCND1Q9NSA2 647 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 CATSPERZQ9NTU4 200 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 GALPQ9UBC7 116 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 PADI1Q9ULC6 663 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 KLHL20Q9Y2M5 609 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 KCNMB2Q9Y691 235 aa16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 SPENQ96T58 3664 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-201ENST00000355572 TMEM150CB9EJG8 249 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 CREG1O75629 220 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 CHRM5P08912 532 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 TPSB2P20231 275 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 RORAP35398 523 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms