RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PDHA1P08559 390 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 CCDC166P0CW27 439 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 GIMD1P0DJR0 217 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 ZNF37AP17032 561 aaPredicted RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 GNLYP22749 145 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ADSLP30566 484 aaPredicted RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 SLC8A1P32418 973 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 GLRBP48167 497 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 RXRGP48443 463 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TTPAP49638 278 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 RPL14P50914 215 aaKnown RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 MNAT1P51948 309 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 CDKN2DP55273 166 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 C21orf59P57076 290 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TIAL1Q01085 375 aaKnown RBP eCLIP8.08□□□□□ -1.12
CD44-205ENST00000352818 KCNAB2Q13303 367 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 CSHL1Q14406 222 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 DNAL1Q4LDG9 190 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ARL13AQ5H913 290 aaPredicted RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 ARMC12Q5T9G4 340 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 FHL5Q5TD97 284 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 SEL1L3Q68CR1 1132 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 LINGO4Q6UY18 593 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 FRMD7Q6ZUT3 714 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 VASH2Q86V25 355 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TREML1Q86YW5 311 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 BBS7Q8IWZ6 715 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 STK40Q8N2I9 435 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 SLC25A45Q8N413 288 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TEX9Q8N6V9 391 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 FAM13CQ8NE31 585 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 OR4K2Q8NGD2 314 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 GRIN3AQ8TCU5 1115 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 DDI1Q8WTU0 396 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 PIH1D2Q8WWB5 315 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ISG20Q96AZ6 181 aaKnown RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 EXOC2Q96KP1 924 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 RILPQ96NA2 401 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TUBGCP5Q96RT8 1024 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 MIPEPQ99797 713 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 CADM1Q9BY67 442 aaKnown RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 CEP44Q9C0F1 390 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 DERL2Q9GZP9 239 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ADNPQ9H2P0 1102 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TFB2MQ9H5Q4 396 aaKnown RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 COG4Q9H9E3 785 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 SYTL2Q9HCH5 934 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 SPHK2Q9NRA0 654 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 TMCO1Q9UM00 188 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ZNF711Q9Y462 761 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 ENTPD2Q9Y5L3 495 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 OAS3Q9Y6K5 1087 aaKnown RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 SDK2Q58EX2 2172 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 SVILO95425 2214 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 TACC2O95359 2948 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 GOLGA8QA0A0J9YX86 632 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 GOLGA8OA6NCC3 632 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 TRPC5OSA6NMA1 111 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 A8MT66 165 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 GOLGA8NF8WBI6 632 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CCL22O00626 93 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 STX7O15400 261 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 GYG2O15488 501 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 GSC2O15499 205 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 GRID2O43424 1007 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 KERAO60938 352 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 PIGNO95427 931 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 SEMA4FO95754 770 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 IGSF6O95976 241 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CHRNGP07510 517 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 PIRTP0C851 137 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CD1DP15813 335 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 TFEBP19484 476 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 RPS3P23396 243 aaKnown RBP eCLIP8.07□□□□□ -1.12
CD44-205ENST00000352818 CCND1P24385 295 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 MPSTP25325 297 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 HMGCLP35914 325 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 RAP1GDS1P52306 607 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 NAGLUP54802 743 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 ALDH18A1P54886 795 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 MLLT10P55197 1068 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 NXPH1P58417 271 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 ATP6V0D1P61421 351 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CACNG1Q06432 222 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 PITRM1Q5JRX3 1037 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CFAP157Q5JU67 520 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 TMEM207Q6UWW9 146 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CERS6Q6ZMG9 384 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 ACAD11Q709F0 780 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 APCDD1Q8J025 514 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 AFAP1L2Q8N4X5 818 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 NKAPQ8N5F7 415 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
CD44-205ENST00000352818 KDM1BQ8NB78 822 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 ANKRD49Q8WVL7 239 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 KCNJ9Q92806 393 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.07□□□□□ -1.12
CD44-205ENST00000352818 OTUB2Q96DC9 234 aa8.07□□□□□ -1.12
CD44-205ENST00000352818 CMTM5Q96DZ9 223 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms