RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 CRTC2Q53ET0 693 aaPredicted RBP12.89□□□□□ -0.35
CLCC1-202ENST00000348264 FASTKD1Q53R41 847 aaKnown RBP12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PCID2Q5JVF3 399 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PRAMEF17Q5VTA0 474 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 LYPLAL1Q5VWZ2 237 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 GSTA5Q7RTV2 222 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 AMIGO1Q86WK6 493 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PRELID2Q8N945 189 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PEX13Q92968 403 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 SGSM3Q96HU1 749 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 FCRL4Q96PJ5 515 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 KLHL25Q9H0H3 589 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 ADNPQ9H2P0 1102 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 C1GALT1Q9NS00 363 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 CATSPERZQ9NTU4 200 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 ASF1AQ9Y294 204 aa12.89□□□□□ -0.35
CLCC1-202ENST00000348264 SPENQ96T58 3664 aaKnown RBP12.89□□□□□ -0.35
CLCC1-202ENST00000348264 CCDC88CQ9P219 2028 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TCRBV7S3A2A0A539 114 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 IQCF5A8MTL0 148 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 SLC28A2O43868 658 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 CPNE3O75131 537 aaKnown RBP12.88□□□□□ -0.35
CLCC1-202ENST00000348264 KATNA1O75449 491 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 SCRG1O75711 98 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 MT-ND3P03897 115 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 FURINP09958 794 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TPBGLP0DKB5 382 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 NMBRP28336 390 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 CCR7P32248 378 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 ABRQ12979 859 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 GPS2Q13227 327 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 KCNAB2Q13303 367 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
CLCC1-202ENST00000348264 ZNF789Q5FWF6 425 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TMTC4Q5T4D3 741 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 FAM199XQ6PEV8 388 aaPredicted RBP12.88□□□□□ -0.35
CLCC1-202ENST00000348264 SPESP1Q6UW49 350 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 PRICKLE2Q7Z3G6 844 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TRIM73Q86UV7 250 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 BPHLQ86WA6 291 aaPredicted RBP12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TMEM126BQ8IUX1 230 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 VRK3Q8IV63 474 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 SLC38A9Q8NBW4 561 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 OR5K2Q8NHB8 316 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TTC1Q99614 292 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 IL22Q9GZX6 179 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 SLC25A18Q9H1K4 315 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 LATS2Q9NRM7 1088 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 SYBUQ9NX95 663 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 ACTR10Q9NZ32 417 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
CLCC1-202ENST00000348264 PLAGL1Q9UM63 463 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 PCDHGA6Q9Y5G7 932 aa12.88□□□□□ -0.35
CLCC1-202ENST00000348264 ASH1LQ9NR48 2969 aaKnown RBP12.87□□□□□ -0.35
CLCC1-202ENST00000348264 C2orf74A8MZ97 194 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TMEM150CB9EJG8 249 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 J3QKU1 62 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 NRDCO43847 1150 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 ZIC2O95409 532 aaPredicted RBP12.87□□□□□ -0.35
CLCC1-202ENST00000348264 SFTPCP11686 197 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 UGT2B7P16662 529 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TPSB2P20231 275 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 MGAT1P26572 445 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 ARNTP27540 789 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 VPS41P49754 854 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TERF1P54274 439 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 RPS18P62269 152 aaKnown RBP12.87□□□□□ -0.35
CLCC1-202ENST00000348264 ERV3-1Q14264 604 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 KCNJ11Q14654 390 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TPSAB1Q15661 275 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 AARS2Q5JTZ9 985 aaKnown RBP12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 C4orf22Q6V702 233 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 UNC5AQ6ZN44 842 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TMEM135Q86UB9 458 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TBC1D21Q8IYX1 336 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 SLC22A15Q8IZD6 547 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 KRT222Q8N1A0 295 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 OR8K5Q8NH50 307 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 FLVCR1-AS1Q8TAF5 88 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 ACTL8Q9H568 366 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 SPHK1Q9NYA1 384 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 BFARQ9NZS9 450 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 CDYLQ9Y232 598 aa12.87□□□□□ -0.35
CLCC1-202ENST00000348264 TDRKHQ9Y2W6 561 aaKnown RBP12.87□□□□□ -0.35
CLCC1-202ENST00000348264 HEMK1Q9Y5R4 338 aaPredicted RBP12.87□□□□□ -0.35
CLCC1-202ENST00000348264 SETXQ7Z333 2677 aaKnown RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 ANKRD12Q6UB98 2062 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 PIPSLA2A3N6 862 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CDC14CA4D256 554 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms