RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 GPSM3Q9Y4H4 160 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 DNAH14Q0VDD8 3507 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 RTCAO00442 366 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 NME4O00746 187 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 ARPC2O15144 300 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 POP4O95707 220 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 PTPN2P17706 415 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 VARSP26640 1264 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 CCT8P50990 548 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 HK2P52789 917 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 AP1S1P61966 158 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 PHEXP78562 749 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CNTN1Q12860 1018 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CARD16Q5EG05 197 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 FAM109BQ6ICB4 259 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 NCEH1Q6PIU2 408 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CYS1Q717R9 158 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 SFTPA1Q8IWL2 248 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 ZNF614Q8N883 585 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 IRF7Q92985 503 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 PLEKHG4BQ96PX9 1271 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 KLHL20Q9Y2M5 609 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 NINQ8N4C6 2090 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 DRGXA6NNA5 263 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 ZNF195O14628 629 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 WFS1O76024 890 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CHRM5P08912 532 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 HSMCR30P0CW71 290 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 HOXC8P31273 242 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 GPC1P35052 558 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CHI3L1P36222 383 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 SLC6A11P48066 632 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 IDH2P48735 452 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 SMARCB1Q12824 385 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 TPGS2Q68CL5 300 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 HEPHQ9BQS7 1158 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CCDC28BQ9BUN5 200 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CHID1Q9BWS9 393 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 MKS1Q9NXB0 559 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 MAP4K5Q9Y4K4 846 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 PARP14Q460N5 1801 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 LINC00854A0A1B0GVQ3 168 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 NRG2O14511 850 aaPredicted RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 KCNH1O95259 989 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 MTHFD2P13995 350 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 PDHA2P29803 388 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 HMGCLP35914 325 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 ZNF140P52738 457 aaPredicted RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 CCSMST1Q4G0I0 132 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 ZSWIM9Q86XI8 627 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 LILRA2Q8N149 483 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 NXPE1Q8N323 547 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 OR2T34Q8NGX1 318 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 OR2T3Q8NH03 318 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TRMOQ9BU70 441 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 SMURF2Q9HAU4 748 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 LTB4R2Q9NPC1 389 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 PRPF19Q9UMS4 504 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 NEU3Q9UQ49 428 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 SPAG17Q6Q759 2223 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3DA0A087WVF3 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3IA0A087WXS9 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3EA0A087X179 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3KA0A087X1G2 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3FA6NER0 549 aaPredicted RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3LB9A6J9 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 B4GAT1O43505 415 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 GNAO1P09471 354 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3HP0C7X1 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 TNFRSF1BP20333 461 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 HTR7P34969 479 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3GQ6DHY5 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3CQ6IPX1 549 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 DUS1LQ6P1R4 473 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 GPR180Q86V85 440 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 SLC15A3Q8IY34 581 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TBC1D3Q8IZP1 549 aaPredicted RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 TAGAPQ8N103 731 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 SFRP1Q8N474 314 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 OR2T11Q8NH01 316 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 OR14C36Q8NHC7 312 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 EID2BQ96D98 161 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 CWH43Q9H720 699 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 MRPL40Q9NQ50 206 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 INTS10Q9NVR2 710 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 KCNK6Q9Y257 313 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 CATP04040 527 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 DDX5P17844 614 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms