RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ACSS3Q9H6R3 686 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 SYNDIG1Q9H7V2 258 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 ANKZF1Q9H8Y5 726 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 SYTL2Q9HCH5 934 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 PABPN1LA6NDY0 278 aaKnown RBP11.54□□□□□ -0.56
SNCA-202ENST00000345009 CPNE6O95741 557 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 RPLP0P05388 317 aaKnown RBP11.54□□□□□ -0.56
SNCA-202ENST00000345009 INHBAP08476 426 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 ABHD2P08910 425 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 JUPP14923 745 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 SAT1P21673 171 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 OR1D5P58170 312 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 IL2P60568 153 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 POU4F1Q01851 419 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 ABRQ12979 859 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 PERM1Q5SV97 790 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 N4BP2L1Q5TBK1 243 aaPredicted RBP11.54□□□□□ -0.56
SNCA-202ENST00000345009 ARMC6Q6NXE6 501 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 DHRS13Q6UX07 377 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 NAPRTQ6XQN6 538 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 RBM44Q6ZP01 1051 aaKnown RBP11.54□□□□□ -0.56
SNCA-202ENST00000345009 ERMP1Q7Z2K6 904 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 SFTPA2Q8IWL1 248 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 CACTIN-AS1Q8N1I8 211 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 PHC3Q8NDX5 983 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 CFAP61Q8NHU2 1237 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 LKAAEAR1Q8TD35 194 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 LCN9Q8WX39 176 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 FAM136AQ96C01 138 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 ATXN7L3BQ96GX2 97 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 ELMO2Q96JJ3 720 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 DEPDC7Q96QD5 511 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 NDNQ99608 321 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 RBBP8Q99708 897 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 FUT8Q9BYC5 575 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 KIR3DX1Q9H7L2 352 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 TOR4AQ9NXH8 423 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 PSAT1Q9Y617 370 aa11.54□□□□□ -0.56
SNCA-202ENST00000345009 CFAP20Q9Y6A4 193 aaKnown RBP11.54□□□□□ -0.56
SNCA-202ENST00000345009 IGHV1OR21-1A0A087WYE8 117 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 FAM95CA0A1B0GW59 222 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 CXorf49A8MYA2 514 aaPredicted RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 B4GAT1O43505 415 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 UBXN7O94888 489 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 DKK1O94907 266 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 CATP04040 527 aaKnown RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 STMN1P16949 149 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 MAP4P27816 1152 aaKnown RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 ACADLP28330 430 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 MSH2P43246 934 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 SERPINB9P50453 376 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 CCL7P80098 99 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 SQSTM1Q13501 440 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 GPR18Q14330 331 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 USP10Q14694 798 aaKnown RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 UAP1Q16222 522 aaPredicted RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 MAP9Q49MG5 647 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 EMBQ6PCB8 327 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 WDR74Q6RFH5 385 aaPredicted RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 PLXDC1Q8IUK5 500 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 DCUN1D3Q8IWE4 304 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 MYO1HQ8N1T3 1032 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 NKAPQ8N5F7 415 aaKnown RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 SIDT2Q8NBJ9 832 aaKnown RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 OR5K2Q8NHB8 316 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 CD200R1Q8TD46 325 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 NCSTNQ92542 709 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 RAD51AP1Q96B01 352 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 ZDHHC12Q96GR4 267 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 TMEM74Q96NL1 305 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 STRADBQ9C0K7 418 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 SRMSQ9H3Y6 488 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 TFB2MQ9H5Q4 396 aaKnown RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 POPDC3Q9HBV1 291 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 SMYD2Q9NRG4 433 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 AKAP7Q9P0M2 348 aaPredicted RBP11.53□□□□□ -0.56
SNCA-202ENST00000345009 SLC17A6Q9P2U8 582 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 SLC24A2Q9UI40 661 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 SLC39A10Q9ULF5 831 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 CLCA2Q9UQC9 943 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 CDYLQ9Y232 598 aa11.53□□□□□ -0.56
SNCA-202ENST00000345009 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.56
SNCA-202ENST00000345009 CACNA1AO00555 2505 aa11.52□□□□□ -0.56
SNCA-202ENST00000345009 EXOC1LA0A1B0GW35 172 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 MATN2O00339 956 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 RIPK2O43353 540 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 ZBTB14O43829 449 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 KRT38O76015 456 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 MT-CO3P00414 261 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 PROS1P07225 676 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 FAM153BP0C7A2 387 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 MPC1LP0DKB6 136 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 FDXRP22570 491 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 CNTFP26441 200 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 CD1CP29017 333 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 CRABP2P29373 138 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 SHMT2P34897 504 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms