RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MPP5Q8N3R9 675 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 D2HGDHQ8N465 521 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 SIDT2Q8NBJ9 832 aaKnown RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 LCN9Q8WX39 176 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CPT1BQ92523 772 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 ARHGAP9Q9BRR9 750 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 TRIM56Q9BRZ2 755 aaKnown RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 KIFC1Q9BW19 673 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 SRMSQ9H3Y6 488 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 TFB2MQ9H5Q4 396 aaKnown RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 XKR8Q9H6D3 395 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 MVB12BQ9H7P6 319 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 AKIRIN1Q9H9L7 192 aaPredicted RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 STARD5Q9NSY2 213 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 BFARQ9NZS9 450 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 POMT2Q9UKY4 750 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CCDC88CQ9P219 2028 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 PCM1Q15154 2024 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ZNF891A8MT65 544 aaPredicted RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 PGRMC1O00264 195 aaKnown RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 ZNF185O15231 689 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ZSCAN12O43309 604 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 CSE1LP55060 971 aaKnown RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 TUBB3Q13509 450 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 LARP7Q4G0J3 582 aaKnown RBP eCLIP14□□□□□ -0.17
HMGN3-202ENST00000344726 PWWP2BQ6NUJ5 590 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ARMC6Q6NXE6 501 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ZNF449Q6P9G9 518 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 C6orf15Q6UXA7 325 aaPredicted RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 CAND1Q86VP6 1230 aaKnown RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 PPP1R3BQ86XI6 285 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 KMT5CQ86Y97 462 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ADGRF3Q8IZF5 1079 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 KRT222Q8N1A0 295 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ESX1Q8N693 406 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ACTRT1Q8TDG2 376 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 STARD8Q92502 1023 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 PDLIM2Q96JY6 352 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 RUFY1Q96T51 708 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 TTC1Q99614 292 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 P2RY12Q9H244 342 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 MRM3Q9HC36 420 aaKnown RBP14□□□□□ -0.17
HMGN3-202ENST00000344726 CROTQ9UKG9 612 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 SOX13Q9UN79 622 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ICKQ9UPZ9 632 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 ASF1AQ9Y294 204 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 RPS6KL1Q9Y6S9 549 aa14□□□□□ -0.17
HMGN3-202ENST00000344726 GSAPA4D1B5 854 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 SLC9B1P1A6NJY1 282 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 GOLGA8KD6RF30 607 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 AP3B1O00203 1094 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 PRMT5O14744 637 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-202ENST00000344726 GPC4O75487 556 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-202ENST00000344726 FURINP09958 794 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
HMGN3-202ENST00000344726 HSD11B2P80365 405 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 PRKAA1Q13131 559 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 GPR19Q15760 415 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 SYTL3Q4VX76 610 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 BORAQ6PGQ7 559 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 AMIGO1Q86WK6 493 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 KIAA1143Q96AT1 154 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-202ENST00000344726 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
HMGN3-202ENST00000344726 PDE7BQ9NP56 450 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 FGF21Q9NSA1 209 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 LNPEPQ9UIQ6 1025 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 ANAPC5Q9UJX4 755 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 RARRES3Q9UL19 164 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 PLAGL1Q9UM63 463 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 SNX12Q9UMY4 172 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 BTRCQ9Y297 605 aa13.99□□□□□ -0.17
HMGN3-202ENST00000344726 PHF2O75151 1096 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 VAPBO95292 243 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 PVRP15151 417 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 ST6GAL1P15907 406 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 CDH3P22223 829 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 AOAHP28039 575 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 DLSTP36957 453 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 TTPAP49638 278 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 ARL4DP49703 201 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 POLE2P56282 527 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 ACY1Q03154 408 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
HMGN3-202ENST00000344726 CTSL3PQ5NE16 218 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 PRAMEF17Q5VTA0 474 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 TMEM135Q86UB9 458 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 TBC1D21Q8IYX1 336 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 SLC22A15Q8IZD6 547 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 CARFQ8N187 725 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 AGGF1Q8N302 714 aaeCLIP13.98□□□□□ -0.17
HMGN3-202ENST00000344726 OR5K2Q8NHB8 316 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 ZNF501Q96CX3 271 aaPredicted RBP13.98□□□□□ -0.17
HMGN3-202ENST00000344726 NAP1L3Q99457 506 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms