RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TRHDEQ9UKU6 1024 aa7.99□□□□□ -1.13
ATG4A-201ENST00000343524 SESN1Q9Y6P5 492 aa7.99□□□□□ -1.13
ATG4A-201ENST00000343524 OR5K4A6NMS3 321 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 NT5C1B-RDH14C9J2C7 533 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 MEN1O00255 615 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TSPAN4O14817 238 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 AXIN1O15169 862 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 GSTA4O15217 222 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SULT1B1O43704 296 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 GDF9O60383 454 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 VPS26AO75436 327 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 B3GALNT1O75752 331 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 MAP3K6O95382 1288 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TSPAN12O95859 305 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 PRKCBP05771 671 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 RPS17P08708 135 aaKnown RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 LTA4HP09960 611 aaKnown RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ICAM2P13598 275 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 IL1RNP18510 177 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SAT1P21673 171 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ATICP31939 592 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 HTR7P34969 479 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 CPT1AP50416 773 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 WNT7BP56706 349 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF33BQ06732 778 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 CDH17Q12864 832 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 RAPSNQ13702 412 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 UGCGQ16739 394 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TIGD6Q17RP2 521 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 UGT3A2Q3SY77 523 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 RABL3Q5HYI8 236 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF667Q5HYK9 610 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 KIAA0319Q5VV43 1072 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 NAPEPLDQ6IQ20 393 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TMEM65Q6PI78 240 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ZPBP2Q6X784 338 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 FAM183BPQ6ZVS7 135 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 MOB2Q70IA6 237 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TSPYL5Q86VY4 417 aaPredicted RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ADGRG3Q86Y34 549 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SLC41A1Q8IVJ1 513 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 CARNMT1Q8N4J0 409 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 DPP10Q8N608 796 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 YIPF7Q8N8F6 280 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 DNERQ8NFT8 737 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 OR8J3Q8NGG0 315 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 VANGL1Q8TAA9 524 aaPredicted RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ENKURQ8TC29 256 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 KIAA1143Q96AT1 154 aaPredicted RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TESCQ96BS2 214 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 GPRASP2Q96D09 838 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 P2RY11Q96G91 374 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TRNT1Q96Q11 434 aaKnown RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SIGLEC11Q96RL6 698 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 MIR1-1HGQ9H1L0 117 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SPNS1Q9H2V7 528 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 GSTO2Q9H4Y5 243 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SMURF2Q9HAU4 748 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SMURF1Q9HCE7 757 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 DDX4Q9NQI0 724 aaKnown RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ITM2CQ9NQX7 267 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 GPATCH2LQ9NWQ4 482 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 MAP3K20Q9NYL2 800 aaKnown RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 ZIM2Q9NZV7 527 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 KLHL8Q9P2G9 620 aaPredicted RBP7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TJP2Q9UDY2 1190 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 SRRDQ9UH36 339 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 GMPPBQ9Y5P6 360 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 V9GYQ6 96 aa7.98□□□□□ -1.13
ATG4A-201ENST00000343524 TMEM265A0A087WTH1 108 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CLRN2A0PK11 232 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 K7ERI5 159 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PDHXO00330 501 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 NCAM2O15394 837 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 NOBOXO60393 691 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PLA2G6O60733 806 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 MAFO75444 373 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ERN1O75460 977 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 WDR47O94967 919 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SCELO95171 688 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PAPSS2O95340 614 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PAHP00439 452 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PGK1P00558 417 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ADORA3P0DMS8 318 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 GADD45AP24522 165 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FMO3P31513 532 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 AVPR1AP37288 418 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 RFX2P48378 723 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CAP1Q01518 475 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FPGSQ05932 587 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SNTA1Q13424 505 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 COL28A1Q2UY09 1125 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 TRIM60Q495X7 471 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 BRAT1Q6PJG6 821 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 TMPRSS11AQ6ZMR5 421 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SLC51AQ86UW1 340 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 RNF130Q86XS8 419 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CCDC117Q8IWD4 279 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms