RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SGIP1Q9BQI5 828 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 R3HDMLQ9H3Y0 253 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 NSUN3Q9H649 340 aaKnown RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 SCN2BO60939 215 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 KAT7O95251 611 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 WDR4P57081 412 aaKnown RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 PHOSPHO2Q8TCD6 241 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 BTBD9Q96Q07 612 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 DERL2Q9GZP9 239 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 AP2A2O94973 939 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 ZNF8P17098 575 aaPredicted RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 LIPEQ05469 1076 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 HSPB3Q12988 150 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 DPY19L1Q2PZI1 675 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 ZNF563Q8TA94 476 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 ROPN1LQ96C74 230 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 ADAM30Q9UKF2 790 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 TMEM98Q9Y2Y6 226 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 LCHNA4D1U4 455 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 SLC10A2Q12908 348 aaPredicted RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 MRPL28Q13084 256 aaKnown RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 MBOAT1Q6ZNC8 495 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 HPS6Q86YV9 775 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 TRPV1Q8NER1 839 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 TOP1MTQ969P6 601 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 HIC2Q96JB3 615 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 CDCA3Q99618 268 aaPredicted RBP19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 GRIP2Q9C0E4 1043 aa19.22■□□□□ 0.67
SEMA6C-201ENST00000341697 CDC7O00311 574 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 UGT2B17O75795 530 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 PTPRCAPQ14761 206 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 CAND1Q86VP6 1230 aaKnown RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 PEX13Q92968 403 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 CDH22Q9UJ99 828 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 TAF1P21675 1872 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 CACNA1SQ13698 1873 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 PFKLP17858 780 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 TALDO1P37837 337 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 ERVK-8P63133 956 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SLC9A5Q14940 896 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 TAF13Q15543 124 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 CDK15Q96Q40 435 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 DDX28Q9NUL7 540 aaKnown RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 TOGARAM1Q9Y4F4 1720 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SHOX2O60902 331 aaPredicted RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SRPRAP08240 638 aaKnown RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 HNF1BP35680 557 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 ARRB1P49407 418 aaPredicted RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SLC18A1P54219 525 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 BNIP1Q12981 228 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 RUNX3Q13761 415 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SEMA3AQ14563 771 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 KBTBD6Q86V97 674 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 ANKRD46Q86W74 232 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 KCNJ9Q92806 393 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 RNFT2Q96EX2 444 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 PGAP3Q96FM1 320 aaPredicted RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 ZDHHC7Q9NXF8 308 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SUCOQ9UBS9 1254 aaKnown RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 MAGEB17A8MXT2 336 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 GRID2O43424 1007 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 EDIL3O43854 480 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 TPP2P29144 1249 aaPredicted RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 ALDH4A1P30038 563 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 FOXN2P32314 431 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SPPL2CQ8IUH8 684 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 TEX47Q8TBZ9 253 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 CENPIQ92674 756 aaPredicted RBP19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 MRGPRX2Q96LB1 330 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 KCNK6Q9Y257 313 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 SLC22A14Q9Y267 594 aa19.21■□□□□ 0.67
SEMA6C-201ENST00000341697 MATN4O95460 622 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 RPL10P27635 214 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 VIPR2P41587 438 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 ELAVL3Q14576 367 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 FAM174BQ3ZCQ3 159 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 KLHDC9Q8NEP7 349 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 DNASE1L2Q92874 299 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 CNOT6Q9ULM6 557 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 CFAP20Q9Y6A4 193 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 PRR23D1E9PI22 279 aaPredicted RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 PCDH7O60245 1069 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 DLX3O60479 287 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 PRR23D2P0DMB1 279 aaPredicted RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 WDR45BQ5MNZ6 344 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 TIFABQ6ZNK6 161 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 TMEM145Q8NBT3 493 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 OR2T34Q8NGX1 318 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 OR2T3Q8NH03 318 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 VANGL1Q8TAA9 524 aaPredicted RBP19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 SLC13A3Q8WWT9 602 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 DTNBP1Q96EV8 351 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 OSBPL10Q9BXB5 764 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 VPS29Q9UBQ0 182 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 LRRC14BA6NHZ5 514 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 BDKRB1P46663 353 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 PTSQ03393 145 aa19.2■□□□□ 0.66
SEMA6C-201ENST00000341697 NUDT13Q86X67 352 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms