RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KRT12Q99456 494 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 ARHGAP9Q9BRR9 750 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 ZNF768Q9H5H4 540 aaKnown RBP14.97□□□□□ -0.01
VAPA-201ENST00000340541 TFB2MQ9H5Q4 396 aaKnown RBP14.97□□□□□ -0.01
VAPA-201ENST00000340541 CLMPQ9H6B4 373 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 MVB12BQ9H7P6 319 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 B3GALT1Q9Y5Z6 326 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 OR6C74A6NCV1 312 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 F8W8V4 182 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 STMND1H3BQB6 276 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 SEC31AO94979 1220 aaKnown RBP14.96□□□□□ -0.01
VAPA-201ENST00000340541 TPBGLP0DKB5 382 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 ADARP55265 1226 aaKnown RBP14.96□□□□□ -0.01
VAPA-201ENST00000340541 DHX9Q08211 1270 aaKnown RBP14.96□□□□□ -0.01
VAPA-201ENST00000340541 MORF4L2Q15014 288 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 SYTL3Q4VX76 610 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 ZNF789Q5FWF6 425 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 ANKS6Q68DC2 871 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 ZNF449Q6P9G9 518 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 KLHL35Q6PF15 583 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 SDCCAG8Q86SQ7 713 aaPredicted RBP14.96□□□□□ -0.01
VAPA-201ENST00000340541 ZFAND4Q86XD8 727 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 FAM129CQ86XR2 697 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 IGDCC3Q8IVU1 814 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 UNC5BQ8IZJ1 945 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 OTUD6BQ8N6M0 293 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 SPATA4Q8NEY3 305 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 OR4E2Q8NGC2 313 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 OR52E1Q8NGJ3 308 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 OR5AR1Q8NGP9 310 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 PWWP2AQ96N64 755 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 WDR83Q9BRX9 315 aaKnown RBP14.96□□□□□ -0.01
VAPA-201ENST00000340541 DDA1Q9BW61 102 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 FAM117AQ9C073 453 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 PLAC1Q9HBJ0 212 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 STARD5Q9NSY2 213 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 HRASLS2Q9NWW9 162 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 SLC39A1Q9NY26 324 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 GNPTGQ9UJJ9 305 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 PCDHGA4Q9Y5G9 962 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 MAD1L1Q9Y6D9 718 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 FAM169AQ9Y6X4 670 aa14.96□□□□□ -0.01
VAPA-201ENST00000340541 IGHV5-51A0A0C4DH38 117 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 UBA6A0AVT1 1052 aaPredicted RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 BTN3A3O00478 584 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 SLC28A2O43868 658 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 SLCO2B1O94956 709 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 WISP1O95388 367 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 S1PR4O95977 384 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 F7P08709 466 aaPredicted RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 PGAM1P18669 254 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 SEPHS1P49903 392 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 CSE1LP55060 971 aaKnown RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 EIF3BP55884 814 aaKnown RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 MRPS25P82663 173 aaKnown RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 HSPA14Q0VDF9 509 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 PRKG2Q13237 762 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 KRT33BQ14525 404 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 RNF187Q5TA31 235 aaPredicted RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 CACHD1Q5VU97 1274 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 ZNF470Q6ECI4 717 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 PTRHD1Q6GMV3 140 aaKnown RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 OOSP2Q86WS3 158 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 DENND6AQ8IWF6 608 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 ASZ1Q8WWH4 475 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 LCN9Q8WX39 176 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 SLC41A2Q96JW4 573 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 MAP3K3Q99759 626 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 EBNA1BP2Q99848 306 aaKnown RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 HGH1Q9BTY7 390 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 TSSK1BQ9BXA7 367 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 ASPSCR1Q9BZE9 553 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 SPRY4Q9C004 299 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 TWSG1Q9GZX9 223 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 APMAPQ9HDC9 416 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 FBXO8Q9NRD0 319 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 WDR70Q9NW82 654 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 ICKQ9UPZ9 632 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 ASF1AQ9Y294 204 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 CRYL1Q9Y2S2 319 aa14.95□□□□□ -0.02
VAPA-201ENST00000340541 HEMK1Q9Y5R4 338 aaPredicted RBP14.95□□□□□ -0.02
VAPA-201ENST00000340541 NIPSNAP2O75323 286 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 RASSF9O75901 435 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 ESR1P03372 595 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 APOA4P06727 396 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 NELFEP18615 380 aaKnown RBP14.94□□□□□ -0.02
VAPA-201ENST00000340541 FMO4P31512 558 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 RPL21P46778 160 aaKnown RBP14.94□□□□□ -0.02
VAPA-201ENST00000340541 CSRP3P50461 194 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 ATP1A2P50993 1020 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 KPNA2P52292 529 aaKnown RBP14.94□□□□□ -0.02
VAPA-201ENST00000340541 ITGA8P53708 1063 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 RAB15P59190 212 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 SH3BP2P78314 561 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 CTBP1Q13363 440 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 GBX1Q14549 363 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 CRYMQ14894 314 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 LONRF1Q17RB8 773 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 ZNF572Q7Z3I7 529 aaPredicted RBP14.94□□□□□ -0.02
VAPA-201ENST00000340541 TBC1D21Q8IYX1 336 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms