RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ITPKAP23677 461 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 BMP8BP34820 402 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 ATP4BP51164 291 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 RCN1Q15293 331 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 PLA2G4EQ3MJ16 856 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 C6orf136Q5SQH8 315 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 C6orf163Q5TEZ5 329 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 REP15Q6BDI9 236 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 CRTC3Q6UUV7 619 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 CFAP206Q8IYR0 622 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 SMRP1Q8NCR6 262 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 RAB7BQ96AH8 199 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 SLC32A1Q9H598 525 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 KLQ9UEF7 1012 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 SLC22A14Q9Y267 594 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 PCYT1BQ9Y5K3 369 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 PRR23AA6NEV1 266 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 NR5A2O00482 541 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 RNASEH2AO75792 299 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 MATN4O95460 622 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 PCCBP05166 539 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 ACTR3P61158 418 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 CDC16Q13042 620 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 STX5Q13190 355 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 ADGRE1Q14246 886 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 MAPRE2Q15555 327 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 TRMT5Q32P41 509 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 NEK5Q6P3R8 708 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 DOK6Q6PKX4 331 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 FNDC5Q8NAU1 212 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 HIPK4Q8NE63 616 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 KCNV2Q8TDN2 545 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 STMN2Q93045 179 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 MTFMTQ96DP5 389 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 TEX37Q96LM6 180 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 MKRN2Q9H000 416 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 RNASEH1O60930 286 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 LILRB5O75023 590 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 PSMG1O95456 288 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 ZNF8P17098 575 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 BDKRB1P46663 353 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 MTTPP55157 894 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 SP140Q13342 867 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 NEK10Q6ZWH5 1172 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 ZNF547Q8IVP9 402 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 KLK6Q92876 244 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 DCLRE1BQ9H816 532 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 TRIM39Q9HCM9 518 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 SDR39U1Q9NRG7 319 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 MRGBPQ9NV56 204 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 RIC8BQ9NVN3 520 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 POMPQ9Y244 141 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 GPR45Q9Y5Y3 372 aa21.9■■□□□ 1.1
PDLIM2-203ENST00000339162 SLC16A5O15375 505 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 GSTM1P09488 218 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 GGT5P36269 586 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 ACADVLP49748 655 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 GTF2A1P52655 376 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 SESN3P58005 492 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 CDKL1Q00532 357 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 GSTM4Q03013 218 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 CCDC6Q16204 474 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 CPSF6Q16630 551 aaKnown RBP eCLIP21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 VPS26BQ4G0F5 336 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 ATP6AP1LQ52LC2 224 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 OGFOD2Q6N063 350 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 PGAM4Q8N0Y7 254 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 MAGEC3Q8TD91 643 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC25A23Q9BV35 468 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 NTMT1Q9BV86 223 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 ACTR8Q9H981 624 aa21.89■■□□□ 1.09
PDLIM2-203ENST00000339162 NRP2O60462 931 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 EGFP01133 1207 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 IDO1P14902 403 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 MAP4P27816 1152 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 CTHP32929 405 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 PON2Q15165 354 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 NR6A1Q15406 480 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 TMEM196Q5HYL7 178 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 HABP4Q5JVS0 413 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 SWT1Q5T5J6 900 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 CHRDL2Q6WN34 429 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 BNC2Q6ZN30 1099 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 GANCQ8TET4 914 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 GLMNQ92990 594 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 TACO1Q9BSH4 297 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 LGR4Q9BXB1 951 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 PFDN4Q9NQP4 134 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 HEBP1Q9NRV9 189 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 EPS15L1Q9UBC2 864 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 DOCK9Q9BZ29 2069 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 DENND4AQ7Z401 1863 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 TRPM6Q9BX84 2022 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 ANHXE9PGG2 379 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 PSIP1O75475 530 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 EBLN1P0CF75 366 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 TNFRSF4P43489 277 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC6A12P48065 614 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 THOP1P52888 689 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 LRP8Q14114 963 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms