RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 LRRC37BQ96QE4 947 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 RMI1Q9H9A7 625 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 DNAJC28Q9NX36 388 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 OPTCQ9UBM4 332 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 ANGPTL3Q9Y5C1 460 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 PRAMEF26H0Y7S4 382 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 GIPC1O14908 333 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 MLYCDO95822 493 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 HOXC4P09017 264 aaPredicted RBP14.34□□□□□ -0.11
CBX3-201ENST00000337620 HTR1BP28222 390 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 ARL1P40616 181 aaPredicted RBP14.34□□□□□ -0.11
CBX3-201ENST00000337620 AP1S2P56377 157 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 KIAA1024LP59773 190 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 RPA4Q13156 261 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 GTF2H2Q13888 395 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 NFATC4Q14934 902 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 CCSMST1Q4G0I0 132 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 SLC9B1Q4ZJI4 515 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 PYCR3Q53H96 274 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.34□□□□□ -0.11
CBX3-201ENST00000337620 CDKL4Q5MAI5 379 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 FAM219BQ5XKK7 198 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 GTF2H2CQ6P1K8 395 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 EPGNQ6UW88 154 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 GOLGA7Q7Z5G4 137 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 ALYREFQ86V81 257 aaKnown RBP14.34□□□□□ -0.11
CBX3-201ENST00000337620 RASGRP3Q8IV61 690 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 DEFB119Q8N690 84 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 ATP6V1E2Q96A05 226 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 OR52A5Q9H2C5 316 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 OSGEPL1Q9H4B0 414 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 NOL11Q9H8H0 719 aaKnown RBP14.34□□□□□ -0.11
CBX3-201ENST00000337620 CARS2Q9HA77 564 aaKnown RBP14.34□□□□□ -0.11
CBX3-201ENST00000337620 FGF22Q9HCT0 170 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 PLEKHM1Q9Y4G2 1056 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 HS3ST3A1Q9Y663 406 aa14.34□□□□□ -0.11
CBX3-201ENST00000337620 A0A1B0GTL3 188 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 PRSS38A1L453 326 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 NDUFS2O75306 463 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 SKAP2O75563 359 aaPredicted RBP14.33□□□□□ -0.11
CBX3-201ENST00000337620 CRCPO75575 148 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 STK16O75716 305 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 C1orf105O95561 183 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 KELP23276 732 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 RPL10P27635 214 aaKnown RBP14.33□□□□□ -0.11
CBX3-201ENST00000337620 PRDX3P30048 256 aaKnown RBP14.33□□□□□ -0.11
CBX3-201ENST00000337620 CXCL12P48061 93 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 HNMTP50135 292 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 CCR3P51677 355 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 THOP1P52888 689 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 PFN3P60673 137 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 ZXDAP98168 799 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 TPRG1LQ5T0D9 272 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 METRNLQ641Q3 311 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 Q6ZSR6 202 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 CCDC121Q6ZUS5 278 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 RD3Q7Z3Z2 195 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 CLYBLQ8N0X4 340 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 TCAIMQ8N3R3 496 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 CAMKK1Q8N5S9 505 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 AGAP11Q8TF27 550 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 FAR2Q96K12 515 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 APOBEC2Q9Y235 224 aaKnown RBP14.33□□□□□ -0.11
CBX3-201ENST00000337620 KCNK6Q9Y257 313 aa14.33□□□□□ -0.11
CBX3-201ENST00000337620 GOLGA8QA0A0J9YX86 632 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 GOLGA8OA6NCC3 632 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 C10orf142B7Z368 130 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 GOLGA8NF8WBI6 632 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 K7EPI3 171 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 AZIN1O14977 448 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 JUNP05412 331 aaKnown RBP14.33□□□□□ -0.12
CBX3-201ENST00000337620 DCBLD1Q8N8Z6 715 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 TMEM145Q8NBT3 493 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 UBTD2Q8WUN7 234 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 CCT6BQ92526 530 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 PYCR2Q96C36 320 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 WDR92Q96MX6 357 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
CBX3-201ENST00000337620 KCNA7Q96RP8 456 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 ZDHHC5Q9C0B5 715 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 ATG10Q9H0Y0 220 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 STN1Q9H668 368 aaKnown RBP14.33□□□□□ -0.12
CBX3-201ENST00000337620 WDR55Q9H6Y2 383 aaPredicted RBP14.33□□□□□ -0.12
CBX3-201ENST00000337620 IPPKQ9H8X2 491 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 ASF1AQ9Y294 204 aa14.33□□□□□ -0.12
CBX3-201ENST00000337620 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.33□□□□□ -0.12
CBX3-201ENST00000337620 ZFC3H1O60293 1989 aaKnown RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 KLHL33A6NCF5 533 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 KIAA0754O94854 1291 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 ACADLP28330 430 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 EPHA3P29320 983 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 FOXA1P55317 472 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 YPEL5P62699 121 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 SYVN1Q86TM6 617 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 PDZD3Q86UT5 571 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 KIRREL3Q8IZU9 778 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 PHC3Q8NDX5 983 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 OR1E3Q8WZA6 343 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 TSACCQ96A04 125 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms