RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ARGFXA6NJG6 315 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 TMEM150CB9EJG8 249 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 E7EQ34 232 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 E7EVH7 732 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 H7C0S8 307 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 K7EM74 188 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 BTN3A1O00481 513 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 LIN7AO14910 233 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-202ENST00000337571 DDX3YO15523 660 aaKnown RBP10.34□□□□□ -0.75
CAPN3-202ENST00000337571 VPS4BO75351 444 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 DNAJB5O75953 348 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 METTL18O95568 372 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 FTH1P02794 183 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 RAB40ALP0C0E4 278 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 PDHA2P29803 388 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 MLLT10P55197 1068 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 PLEKHS1Q5SXH7 462 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 LYPLAL1Q5VWZ2 237 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 DSELQ8IZU8 1212 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 SLC38A9Q8NBW4 561 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 OR52E1Q8NGJ3 308 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 ELMO1Q92556 727 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAPN3-202ENST00000337571 PPM1MQ96MI6 270 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 BAG1Q99933 345 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-202ENST00000337571 DPH2Q9BQC3 489 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-202ENST00000337571 NLNQ9BYT8 704 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 ING2Q9H160 280 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 OR52A5Q9H2C5 316 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 POLG2Q9UHN1 485 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 VPS4AQ9UN37 437 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 PLAAQ9Y263 795 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 PADI2Q9Y2J8 665 aa10.34□□□□□ -0.75
CAPN3-202ENST00000337571 TRBV5-4A0A0C4DH59 114 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 CCDC78A2IDD5 438 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 C9J4A7 227 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 BTN3A3O00478 584 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 AP2A1O95782 977 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 CD63P08962 238 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 OR56A5P0C7T3 313 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 MSL3P1P0C860 447 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ST6GAL1P15907 406 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 MSNP26038 577 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 STIP1P31948 543 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 SHMT2P34897 504 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 PPARGP37231 505 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ITGA1P56199 1179 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 PLOD1Q02809 727 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 BOP1Q14137 746 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 BRD3Q15059 726 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 SYTL3Q4VX76 610 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 KCTD11Q693B1 232 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 PPP1R21Q6ZMI0 780 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ZNF517Q6ZMY9 492 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TAB3Q8N5C8 712 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ENDOVQ8N8Q3 282 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 LRRC57Q8N9N7 239 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ACRBPQ8NEB7 543 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TCTN2Q96GX1 697 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TRAPPC9Q96Q05 1148 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 C17orf62Q9BQA9 187 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TMEM121Q9BTD3 319 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 HGH1Q9BTY7 390 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TSSK1BQ9BXA7 367 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TRIM55Q9BYV6 548 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 KLHL25Q9H0H3 589 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 XKR8Q9H6D3 395 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 PIH1D1Q9NWS0 290 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 IRAK4Q9NWZ3 460 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ACTR10Q9NZ32 417 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 GPN3Q9UHW5 284 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TCFL5Q9UL49 500 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 ASF1AQ9Y294 204 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 TDRKHQ9Y2W6 561 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
CAPN3-202ENST00000337571 AP1M2Q9Y6Q5 423 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 SPTA1P02549 2419 aa10.33□□□□□ -0.76
CAPN3-202ENST00000337571 FLNCQ14315 2725 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 MROH6A6NGR9 719 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ERI2A8K979 691 aaKnown RBP10.32□□□□□ -0.76
CAPN3-202ENST00000337571 GPR37O15354 613 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ZNF749O43361 778 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 OR2B3O76000 313 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 TMEM63AO94886 807 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 FTCDO95954 541 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PRSS56P0CW18 603 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 RRADP55042 308 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 CDH17Q12864 832 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 IL10RAQ13651 578 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ITIH4Q14624 930 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 DBN1Q16643 649 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PRAMEF17Q5VTA0 474 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 SPESP1Q6UW49 350 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 UNC5AQ6ZN44 842 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 MED25Q71SY5 747 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 RAB43Q86YS6 212 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms