RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PRAMEF17Q5VTA0 474 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 EIF5AL1Q6IS14 154 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 AQP12AQ8IXF9 295 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PWWP2AQ96N64 755 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 SPATA9Q9BWV2 254 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 LGR4Q9BXB1 951 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 FAM234BA2RU67 622 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 UGT2B4P06133 528 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 NELFEP18615 380 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 BMP6P22004 513 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 CHIT1Q13231 466 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 VMACQ2NL98 169 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 RALGPS2Q86X27 583 aaPredicted RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 PM20D2Q8IYS1 436 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 DQX1Q8TE96 717 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 EXOSC8Q96B26 276 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 CPXM1Q96SM3 734 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 TCF7L1Q9HCS4 588 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 LRCH4O75427 683 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 SRCP12931 536 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 PRR23CQ6ZRP0 262 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 ZSWIM3Q96MP5 696 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 PHB2Q99623 299 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 TFB2MQ9H5Q4 396 aaKnown RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 UCKL1Q9NWZ5 548 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 AQP1P29972 269 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 AVPR1BP47901 424 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 RORCP51449 518 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 TSPAN5P62079 268 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 NRG1Q02297 640 aaPredicted RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 BLMHQ13867 455 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 TMEM17Q86X19 198 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 ATRNO75882 1429 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 C5orf51A6NDU8 294 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 ZNF99A8MXY4 864 aaPredicted RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 RENP00797 406 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 YES1P07947 543 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 TACSTD2P09758 323 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 NR2C1P13056 603 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 HSD3B1P14060 373 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 SELPP16109 830 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 GNALP38405 381 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 EEFSECP57772 596 aaKnown RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 RBM48Q5RL73 367 aaKnown RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 RNF220Q5VTB9 566 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 CEP68Q76N32 757 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 CNDP2Q96KP4 475 aaKnown RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 SLC22A4Q9H015 551 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 CNOT6Q9ULM6 557 aaKnown RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 PDPK1O15530 556 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 ZNF208O43345 1280 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
HLCS-201ENST00000336648 GADD45GO95257 159 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 BRCC3P46736 316 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 CRISP3P54108 245 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 IL17AQ16552 155 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 LIX1Q8N485 282 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
HLCS-201ENST00000336648 CHRAC1Q9NRG0 131 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 FNIP2Q9P278 1114 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
HLCS-201ENST00000336648 I3L521 148 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 SLC22A1O15245 554 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 B3GALT2O43825 422 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 TLL1O43897 1013 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 OR1I1O60431 355 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 GSTM3P21266 225 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 NDUFV1P49821 464 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 SLC5A3P53794 718 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 CDH12P55289 794 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 CIR1Q86X95 450 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 ZDHHC21Q8IVQ6 265 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 WFIKKN2Q8TEU8 576 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 GPR20Q99678 358 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 EVLQ9UI08 416 aaPredicted RBP12.87□□□□□ -0.35
HLCS-201ENST00000336648 EDARQ9UNE0 448 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 IRF6O14896 467 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 GNAZP19086 355 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 DNAJB1P25685 340 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 IL12BP29460 328 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 MVKQ03426 396 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 DUSP4Q13115 394 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 C6orf52Q5T4I8 152 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
HLCS-201ENST00000336648 OR2AJ1Q8NGZ0 328 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms